| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2656 |
|---|
| Symbol | |
|---|
| ID | 3681958 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 3285444 |
|---|
| End bp | 3286763 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637718001 |
|---|
| Product | peptidase S13, D-Ala-D-Ala carboxypeptidase C |
|---|
| Protein accession | YP_323164 |
|---|
| Protein GI | 75908868 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
|---|
| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGAAT TGTTGAGTTC GGGTTTGGTT TCTATCTGGC TGGAAATGGC TGGTGTGCAA
ATCAAGCCTG CGGATGCTTT AGATGCACTA ACTTGGCAAA GTAGCCCAGG CTTGGTTATT
GCACCTGATC CGAATCCAGC AGGAATTAAT ACAGTCAAGG AATATCTGAA GGGATTAGTC
ACGACAAAAT TAATTGCTCA GAATTTAGCA GAAAGCCAAG GAATTTGGTT GCAGTCAGGG
CCGATGTTGA TGGCTAATCA TCAAGGAACT ACACCTCTGC CGGCAGCTTC TCTCACTAAA
ATTGCTACTT CACTGGCGGC TTTTACTACT TTCGGCCCAG AACATCAATT TGAAACGACG
ATCGCCACTA ATGCTTCAGT TGTTAATGGC GTATTACAAG GTGATTTAAT CATTAATGGC
GGCGGCGACC CGATGTTTGT TTGGGAAGAA GCGATCGCCC TGGGTAATAC GCTCAATAAA
ATGGGAATCA AGCAGGTAAA GGGCAATTTG GTAATTACAG GCAATTTTGC CATGAATTTC
CAACGCCATC CCCTCTTGGC TGGGCAAATG CTCAAACAAT CACTAAATTC TAAAACCTGG
ACTCGTCCAG CAAATTATAT ACATTCCATC ATGCCTAAGG GAACACCAAA GCCCCAGGTA
GTAATTAATG GCACAATCAA ATTTTTCGCC CAGGCCAACC CCAAACAAAC TTTACTTGTG
CGTCACCGTT CCTTACCCTT GAAACAATTG ATCAAGGAGA TGAACGTTTA CAGCAATAAT
GAGATGGCGC AGATGTTGGC AGAAGCGGTG GGAGGCCATA CTGTAGTCCA AGCCAAAGCT
GCCAAACTAG CAAGAGTACC AGAGACAGAA ATTCAATTAA TTAATGGTTC GGGACTGGGC
CCAGAAAATC GAATTTCTCC CAGGGCGGTT TGTGCGATGT TGATGGCGCT GCAACATGAA
GCTGCTGCGG CTCAACTCAA TCTAGCAGAC TTGTTTCCCA TCTCTGGCTT TGATCACCGA
GGCACAATGC ACTCTCGACA TTTGCCGATG GCTACTGTGA TGAAAACTGG GACGTTGCGG
GATGTAAGTG CTTTAGCTGG AGTTGTACCC ACACGCGATC GCGGTTTGGT TTGGTTCGCT
ATCATTAACC GTGGCCCCCA AATTGGCGCT TTCCGCCAAC AACAAGACAA ACTTTTACAA
CGTCTAGTAC AGCAATTACA AGTAGCCCCT AGCACACCCA CAGCCCTTAC CCCCCATTCA
CCTAAATCTT TACCCGATCT GGGGAATACT AACCGCAGTG AAATTGTGTA TGGTGGCTAG
|
|---|
| Protein sequence | MLELLSSGLV SIWLEMAGVQ IKPADALDAL TWQSSPGLVI APDPNPAGIN TVKEYLKGLV
TTKLIAQNLA ESQGIWLQSG PMLMANHQGT TPLPAASLTK IATSLAAFTT FGPEHQFETT
IATNASVVNG VLQGDLIING GGDPMFVWEE AIALGNTLNK MGIKQVKGNL VITGNFAMNF
QRHPLLAGQM LKQSLNSKTW TRPANYIHSI MPKGTPKPQV VINGTIKFFA QANPKQTLLV
RHRSLPLKQL IKEMNVYSNN EMAQMLAEAV GGHTVVQAKA AKLARVPETE IQLINGSGLG
PENRISPRAV CAMLMALQHE AAAAQLNLAD LFPISGFDHR GTMHSRHLPM ATVMKTGTLR
DVSALAGVVP TRDRGLVWFA IINRGPQIGA FRQQQDKLLQ RLVQQLQVAP STPTALTPHS
PKSLPDLGNT NRSEIVYGG
|
|---|
| |