| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2629 |
|---|
| Symbol | |
|---|
| ID | 3681912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 3249644 |
|---|
| End bp | 3253309 |
|---|
| Gene Length | 3666 bp |
|---|
| Protein Length | 1221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637717975 |
|---|
| Product | Fis family transcriptional regulator |
|---|
| Protein accession | YP_323138 |
|---|
| Protein GI | 75908842 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2319] FOG: WD40 repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0193255 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGATTG CTGCTGACGT GTTTCAGCTT CCAGAAGATT TCATCACAGG AGTAGCAACC
AAATATGGTG TTACAAAAAC AGAGCTTGAT GCCTTAGTTT TGGCATTACA CGATCACTCT
GGTGCTGAGA TTGCTGCCAA GCTAGATATT TCTCAACCTG CGGTAAGAAA AAGACTAGGA
GAGAGTTACC GCAAATTAGG TATAGAGGGT AAGGGCAATA AAAAAATTAA TGGACTGAGG
CAAAAGCTAT ATGAGCAATA CCAGCTCACT TATCAACACC CTGTATTTTC ATCGGAAGAC
TGGGGAGAAG CTGTTGATGT GGCCGGGTTT CGGGGGCGAA AGGAACCACT TCTAGAATTG
GAACAATGGA TAGAAGGTAA TGGTTCTAAT CGTTGTCGCC TAGTGGCGGT ATTGGGAATG
GGGGGAATAG GCAAGACCGT ATTAGCGGCG ATGGTCGCTA AGAAAGTCCA AAAGGAGTTT
GATTATTTGA TTTGGCGATC GCTCCGCAAT GCTCCATCAC TGGGAGATAT TCTCACACAA
CTGCTGCGCT TTTTAGCTAA TGAAAATGAA AATGATTTAG CAGACACTGA TAACAATAAA
ATAGTCAGAC TGATAGATGT TTTAAGAAAA AAAAGATGTT TGGTAATTTT AGATAATGTT
GAATCAGTCC TTCGTAGTGG CGAGGGCAAA AATCAAGAAT GGGCTGGTGA ATATCAACCA
GGATACGAAA ACTACGGTTA TTTATTTAAA AAAGTAGCCG AAGCTTCTCA CGAAAGTTGC
TTGTTATTAA CTAGCCGAGA AAAACCCAAA GAGGTAGCAG CCTTAGAAGG TAAAAATCTG
CCTGTCAAAG TGTTGCAGCT ATCAAGTCTT AACTTAGCAG AAGCTAGGGA AATTTTGCTG
GATAAGGGGT GTTACTGCAC TGACGAACAG TTAGATGAAT TAGTCAGACG TTATTCTGGC
AATCCTTTAG CGCTGAAGAT AGTGGCGACT ACAGTTTATG AGTTATTTAG TAATAATATC
AGTGAATTCC TCGCCCAAAT TCACCAGGAA AGTGCTGTAT ATGGAGATAT TCGCACACTT
TTAAAACAAC AATTCCAACG ACTTTCAGAT TTAGAAAAAA AAGTGATGTA CTCCCTGGGG
GCTAATCGTG AGTATGTTTC TTTTCGAGAG ATTAAAGATG ATTGGCTAAC CACAGAATCG
CCAATCAAAA TTATGGAAGC CTTGGAGTCT TTATTGCGGC GATCTCTAAT CGAGAAGGCT
TCGCCTACGC TCATCGAAAA AGCTTCGTCT ACTCAGGGAG AAAAAGAGGC AGAATCCAGT
AAATTTGGAC TGGAATCTGT GGTCATGGAA TATATCACCG CCAAATTTAT CGAAAACTCT
GTGGAGGAAT TTAGTCAGAA AAAAAAACTC GATTTTATTA ACACCTATCC CTTGATGAAG
GCGCGATCGC TTGATTATAT CCGCCAGATT CAAGAACGGT TAATCTTAGA ACCAGTCAAG
CAGAAGTTAC TCAATATTTT TGGCACAGAA CTAGAACTGC ATTTACGCAG AATGCTAGGA
AATTTACAAA AAGAACCCCT ACCAAAAAAA GGCTATGCTG CCGGTAACTT GATTAATCTC
TTGCGTCAAC TACAACTAGA TAAGTTTCCC GATGAATCCC CCATCGATTT GAGTGGGCGA
GATTTTTCTG GTTTAACCAT CTGGCAAGCT TATTTTAAAG AAGTGAAGTT AAGAGAAACC
ATCTTTGCCA ACTCTGACTT AACTGGTTCT GTCTTCACTG AAACCATGTC TAGTGTGGTG
TCAGTGAGAT TTAGTCCTGA TGGCAAATAC TTTGCTACAG GTTTGATGAA TGGAGAAATT
CGCCTGTGGC AAACCACAGA TAATAAACAA CTGCGTATTT ATAAAGGTCA TACCGCTTGG
GTTTGGGCAT TTGCCTTTAG TCCCGATAGT CGAATGTTAG CTAGTGGTAG TGCTGACTCG
ACAATTAAGC TTTGGGATGT TCACACAGGC GAATGTCTAA AAACACTCTC AAAAAATGCT
AACAAAGTCT ACTCAGTCGC TTTCAGTCCT GATGGTCGCA TCTTAGCCAG TGCCGGTCAA
GATCACACCA TTAAACTTTG GGATATAGCC ACAGGGAATT GTCAACAAAC TCTCCCAGGT
CATGATGATT GGGTGTGGTC TGTCACTTTT AGTCCAGTTA CCGATGATAA GCCGTTGTTA
CTCGCCAGTA GCAGCGCTGA TCAGCATATC AAACTGTGGG ATGTTGCCAC AGGTAAGTGT
CTGAAGACTC TCAAAGGTCA TACTAAGGAG GTTCACTCTG TTAGCTTTAG TCCCGATGGT
CAAACCTTAG CCAGTAGTGG CGAAGACAGC ACCGTCAGAC TGTGGGATGT GAAAACAGGA
CAGTGCGGGC AAATATTTGA AGGACATAGT AAAAAAGTTT ATTCTGTACG CTTTAGCCCT
GACGGAGAAA CCCTAGCTAG CTGTGGCGAA GACCGCAGCG TCAAACTTTG GGATATTCAA
CGCGGTGAAT GTACCAATAC CCTATGGGGA CATTCTAGCC AAGTTTGGGC GATCGCCTTC
AGTCCTGATG GACGTACACT AATTAGCTGT AGCGATGACC AAACAGCCAG ACTTTGGGAT
GTCATCACAG GTAATTCCCT TAATATCCTG CGCGGTTACA CCCGTGATGT TTATTCAGTC
GCCTTTAGTC CCGATAGTCA AATTCTCGCC AGTGGTCGTG ATGACTACAC TATCGGACTC
TGGAACTTAA ACACAGGAGA ATGTCACCCC CTACGGGGAC ATCAAGGACG CATTCGTTCC
GTCGCCTTTC ATCCCGATGG GCAAATACTC GCCAGTGGTA GCGCCGATAA CACCATTAAG
CTGTGGGATA TCAGCGACAC TAACCACAGC AGATGTATTC GTACACTTAC AGGACATACT
AACTGGGTAT GGACGGTGGT CTTTAGTCCC GACAAGCATA CCCTCGCCAG CAGCAGTGAA
GACCGCACCA TCCGCCTGTG GGATAAAGAT ACAGGTGATT GTCTCCAAAA ATTAAAGGGA
CACAGCCATT GGGTATGGAC AGTAGCTTTT AGTCCTGATG GCCGCACCTT AGCCAGTGGC
AGTGCTGACA GTGAAATTAA AATTTGGGAT GTTGCTAGCG GTGAATGTCT GCAAACTTTG
ACAGATCCTC TGGGCATGAT TTGGTCGGTA GCATTTAGTC TCGATGGCGC ATTACTTGCC
AGCGCTAGCG AAGACCAAAC AGTCAAGTTA TGGAATTTAA AAACAGGCGA ATGCGTCCAC
ACCCTCACAG GACACGATAA ACAGGTTTAC TCAGTTGCAT TTAGTCCCAA TGGGCAAATT
TTAGCTAGTG GTAGCGAAGA TACCACCGTG AAGCTATGGG ACATCAGCAA AGGTTCATGT
ATTGACACTC TCAAACATGG ACATACAGCC GCAATTCGTT CTGTAGCTTT CAGTCCTGAT
GGCAGATTGC TTGCTAGTGG TAGCGAAGAT GAAAAAATTC AACTGTGGGA TATGCAAAAT
TGTAGCCGCC TGAAAACCCT CAAATCTCCT CGCTTGTATG AAAATATGGA CATTACCGAT
ATCACAGGTA TTACAGACGC GGAAAAAGCT TCTTTGAAAA TGTTGGGTGC AGTTGAGGAA
AGTTAA
|
|---|
| Protein sequence | MMIAADVFQL PEDFITGVAT KYGVTKTELD ALVLALHDHS GAEIAAKLDI SQPAVRKRLG
ESYRKLGIEG KGNKKINGLR QKLYEQYQLT YQHPVFSSED WGEAVDVAGF RGRKEPLLEL
EQWIEGNGSN RCRLVAVLGM GGIGKTVLAA MVAKKVQKEF DYLIWRSLRN APSLGDILTQ
LLRFLANENE NDLADTDNNK IVRLIDVLRK KRCLVILDNV ESVLRSGEGK NQEWAGEYQP
GYENYGYLFK KVAEASHESC LLLTSREKPK EVAALEGKNL PVKVLQLSSL NLAEAREILL
DKGCYCTDEQ LDELVRRYSG NPLALKIVAT TVYELFSNNI SEFLAQIHQE SAVYGDIRTL
LKQQFQRLSD LEKKVMYSLG ANREYVSFRE IKDDWLTTES PIKIMEALES LLRRSLIEKA
SPTLIEKASS TQGEKEAESS KFGLESVVME YITAKFIENS VEEFSQKKKL DFINTYPLMK
ARSLDYIRQI QERLILEPVK QKLLNIFGTE LELHLRRMLG NLQKEPLPKK GYAAGNLINL
LRQLQLDKFP DESPIDLSGR DFSGLTIWQA YFKEVKLRET IFANSDLTGS VFTETMSSVV
SVRFSPDGKY FATGLMNGEI RLWQTTDNKQ LRIYKGHTAW VWAFAFSPDS RMLASGSADS
TIKLWDVHTG ECLKTLSKNA NKVYSVAFSP DGRILASAGQ DHTIKLWDIA TGNCQQTLPG
HDDWVWSVTF SPVTDDKPLL LASSSADQHI KLWDVATGKC LKTLKGHTKE VHSVSFSPDG
QTLASSGEDS TVRLWDVKTG QCGQIFEGHS KKVYSVRFSP DGETLASCGE DRSVKLWDIQ
RGECTNTLWG HSSQVWAIAF SPDGRTLISC SDDQTARLWD VITGNSLNIL RGYTRDVYSV
AFSPDSQILA SGRDDYTIGL WNLNTGECHP LRGHQGRIRS VAFHPDGQIL ASGSADNTIK
LWDISDTNHS RCIRTLTGHT NWVWTVVFSP DKHTLASSSE DRTIRLWDKD TGDCLQKLKG
HSHWVWTVAF SPDGRTLASG SADSEIKIWD VASGECLQTL TDPLGMIWSV AFSLDGALLA
SASEDQTVKL WNLKTGECVH TLTGHDKQVY SVAFSPNGQI LASGSEDTTV KLWDISKGSC
IDTLKHGHTA AIRSVAFSPD GRLLASGSED EKIQLWDMQN CSRLKTLKSP RLYENMDITD
ITGITDAEKA SLKMLGAVEE S
|
|---|
| |