Gene Ava_2618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2618 
Symbol 
ID3681082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3238945 
End bp3240144 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content43% 
IMG OID637717965 
Producthypothetical protein 
Protein accessionYP_323128 
Protein GI75908832 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.308953 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACC CTCAAACCGT TAGTAATGCT GTAGCTAAAC TCTACGATAC TTATCCCTTC 
CCGCCAGAAC CGATACTAGA TGAACCACCT CCTGGTTACA ATTGGCGCTG GAATTGGTTA
GCGGCTTACA GCTTCTGCAC AGGACAAAAA CCAACAAAGC AAGATATTCG CATATTAGAT
GCTGGTTGTG GTTCAGGTGT GGGGACAGAA TACTTAGTAC ATCTCAACCC CCAAGCGCAA
GTAGTTGGAA TTGATTTAAG TGCAGGTACT CTAGCAGTAG CCAAAGAACG TTGTCAGCGT
TCCGGTGCAA ACCGCGTCGA GTTTCATCAC TTGAGTTTGT ACGATGTGGA ACAGTTACCG
GGTGAGTTTA ATTTAATTAA CTGTGTCGGT GTGTTGCATC ACCTACCAGA TCCAATTCGT
GGTATTCAAG CTTTGGCGAA AAAGTTAGCT CCTGGTGGAC TAATGCACAT TTTTGTGTAT
GGAGAGTTGG GACGCTGGGA AATTCAACTG ATGCAAAAAG CGATCGCACT CCTGCAAAAT
GAGAAACGAG GTGATTACCG CGATGGTGTG CAAGTCGGGC GAAAAATATT TGCCTCTCTG
CCAGAAAATA ATCGTCTTGT CAAGCGAGAA AAAGAACGTT GGGCAATGGA AAACCAACGA
GATGAATGCT TTGCTGATAT GTACGTTCAT CCCCAAGAGG TGGATTACAA CATTGATACA
TTGTTTGAAT TGATTGATGC TTCAGGTTTA GAGTTTATCG GCTTCTCAAA TCCCAGCTTT
TGGAGTTTAG ACAGGTTGTT AGGGAAAGCA CCAGAGTTAA TAGAACGATC TGAAGAATTG
AGCGATCGCC AACGTTATCG TTTAATAGAA TTACTAGACC CAGAAGTTAC CCATTACGAA
TTTTTCCTTG GTCGTCCACC TATCAAAAAA GCTGACTGGT CAAGTGATGA CGCTTTACAG
CAAGCAATTC CCGAATTAAA TCCTTGTATC GATGGGTTTC CCGGTCGATG TATATTTAAT
CACGATTACC AAATTGTGAA CTTGTCAGCA CTAGAGTTTG AGTTTTTACA AAAATGTGAT
GGCAATTCTA CCGTAGCTGA GATTTTGGTA AGTGTGCAGT TAAGCTTAGA TGAGGTTAGA
AGCTTAATTA AGCAACAGCT GATTATGCTG ATACCAGATG CAAAGAGCTA TGCCTCATGA
 
Protein sequence
MSDPQTVSNA VAKLYDTYPF PPEPILDEPP PGYNWRWNWL AAYSFCTGQK PTKQDIRILD 
AGCGSGVGTE YLVHLNPQAQ VVGIDLSAGT LAVAKERCQR SGANRVEFHH LSLYDVEQLP
GEFNLINCVG VLHHLPDPIR GIQALAKKLA PGGLMHIFVY GELGRWEIQL MQKAIALLQN
EKRGDYRDGV QVGRKIFASL PENNRLVKRE KERWAMENQR DECFADMYVH PQEVDYNIDT
LFELIDASGL EFIGFSNPSF WSLDRLLGKA PELIERSEEL SDRQRYRLIE LLDPEVTHYE
FFLGRPPIKK ADWSSDDALQ QAIPELNPCI DGFPGRCIFN HDYQIVNLSA LEFEFLQKCD
GNSTVAEILV SVQLSLDEVR SLIKQQLIML IPDAKSYAS