Gene Ava_2612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2612 
Symbol 
ID3681076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3234875 
End bp3235426 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content45% 
IMG OID637717959 
ProductF0F1 ATP synthase subunit delta 
Protein accessionYP_323122 
Protein GI75908826 
COG category[C] Energy production and conversion 
COG ID[COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 
TIGRFAM ID[TIGR01145] ATP synthase, F1 delta subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.279079 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGTA AAGTAGCAAA CACTGAGGTA GCTCAACCTT ACGCTCAGGC ACTGTTGTCA 
ATCGCCAAAT CGAAAAGCTT GACGGAAGAG TTCGGCACAG ATGCGCGTAC TTTGCTGAAC
CTGCTGGCAG AAAATCAGCA GCTACGCAAC TTTATCGACA ACCCCTTTAT TGCAGCTGAG
AACAAAAAAG CTCTCATCAA ACAAATATTG AGTGAAGCTA GCCCTTACCT ACGTAACTTC
TTACTGTTGT TGGTAGATAA ACGACGCATT TTCTTCTTGG AAGAGATTTT ACAGCAGTAT
TTGGCTCTCT TACGGCAACT GAATCAAACC GTATTAGCGG AAGTCACTTC TGCTGTGGCT
TTAACAGAAG ATCAACAGCA AGCAGTTAAA GAAAAGGTAT TGGCACTCAC CAAAGCTCGT
CAAGTGGAAC TGGCAACCAA GGTAGACAGT GACCTGATTG GTGGTGTGAT CATTAAAGTA
GGCTCTCAGG TAATTGACTC TAGTATCCGG GGTCAGTTGC GTCGCCTCTC CTTGCGCCTA
AGCAATAGCT AG
 
Protein sequence
MTSKVANTEV AQPYAQALLS IAKSKSLTEE FGTDARTLLN LLAENQQLRN FIDNPFIAAE 
NKKALIKQIL SEASPYLRNF LLLLVDKRRI FFLEEILQQY LALLRQLNQT VLAEVTSAVA
LTEDQQQAVK EKVLALTKAR QVELATKVDS DLIGGVIIKV GSQVIDSSIR GQLRRLSLRL
SNS