| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2611 |
|---|
| Symbol | |
|---|
| ID | 3681075 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 3233191 |
|---|
| End bp | 3234711 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637717958 |
|---|
| Product | F0F1 ATP synthase subunit alpha |
|---|
| Protein accession | YP_323121 |
|---|
| Protein GI | 161567476 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.169882 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATTT CAATTAGACC TGACGAAATC AGCAGTATTA TTCAGCAGCA AATCGAGCAA
TACGACCAAG AAGTCAAAGT TGCTAACGTC GGTACTGTAC TACAAGTAGG TGACGGTATC
GCCCGGATCT ATGGTCTAGA AAAGGCTATG GCTGGGGAAC TGTTGGAATT TGAAGACGGC
ACAGTTGGTA TCGCCCAAAA CTTAGAAGAA GATAACGTTG GTGCGGTATT GATGGGCGAA
GGCCGGGAAA TTCAAGAAGG TAGCACCGTT ACCGCTACCG GTAGAATTGC TCAAATCGGT
GTTGGTGAAG CCTTAATTGG CCGCGTTGTC GATGCTTTAG GTCGTGCTAT TGACGGTAAA
GGCGACATCA AAGCCAGCGA AAGCCGCTTG ATTGAATCAC CTGCACCTGG TATTATTGCT
CGTCGTTCCG TACACGAACC GATGCAAACA GGTATCACCG CGATTGACTC CATGATTCCC
ATCGGCCGTG GTCAACGGGA ATTAATTATT GGTGACCGTC AAACAGGTAA AACTGCGATC
GCTATCGACA CCATCATTAA CCAAAAAGGT GAAGATGTAG TTTGCGTTTA CGTTGCCATT
GGTCAAAAAG CTTCCACCGT TGCTAACGTA GTCCAAACCC TGCAAGAAAA AGGTGCAATG
GATTACACAG TAGTAGTTGC TGCTGGAGCC AGCGAACCTG CTACCCTACA ATTCTTGGCT
CCCTACACAG GTGCAACCAT TGCTGAGTAC TTCATGTACA AAGGCAAAGC TACCTTGGTA
ATTTACGACG ACTTATCTAA GCAAGCTCAA GCTTATCGCC AAATGTCCTT GCTGTTACGT
CGTCCACCAG GACGGGAAGC TTACCCTGGA GACGTATTCT ACATTCACTC TCGTTTGTTG
GAAAGAGCAG CTAAACTCAG CGATGAATTG GGTAAAGGTA GCATGACCGC GCTACCAATC
ATCGAAACCC AAGCTGGTGA CGTTTCCGCT TACATTCCTA CCAACGTAAT TTCTATCACC
GACGGTCAGA TATTCTTATC TTCTGACTTG TTTAACGCTG GTATTCGTCC GGCTGTAAAC
CCTGGTATCT CTGTATCCCG TGTGGGTTCT GCGGCACAAA CCAAAGCGAT GAAAAAAGTT
GCTGGTAAAA TCAAACTGGA ACTAGCACAG TTTGACGACC TCCAAGCCTT CGCGCAATTT
GCTTCCGACT TAGATAAAGC TACCCAAGAC CAATTGGCAA GAGGTCAACG CCTGCGGGAA
CTCCTCAAAC AGTCTCAAAA TCAGCCCCTA TCCGTAGCTG AACAAGTAGC CATTCTGTAC
GCAGGTATCA ACGGTTACTT AGATGATATC CCTGTTGATA AAGTCACCAC CTTCACCAAA
GGCTTGAGAG ATTACTTGAA GTCTGGCGTT AACCCCTACT TCCAAGACGT ACAATCCAAG
AAAACACTGG GTGATGATGA AGAAAAAGCA TTGAAGGCAG CTTTAGACGA TTACAAAAAA
ACCTTCAAGG CTACAGCGTA A
|
|---|
| Protein sequence | MSISIRPDEI SSIIQQQIEQ YDQEVKVANV GTVLQVGDGI ARIYGLEKAM AGELLEFEDG
TVGIAQNLEE DNVGAVLMGE GREIQEGSTV TATGRIAQIG VGEALIGRVV DALGRAIDGK
GDIKASESRL IESPAPGIIA RRSVHEPMQT GITAIDSMIP IGRGQRELII GDRQTGKTAI
AIDTIINQKG EDVVCVYVAI GQKASTVANV VQTLQEKGAM DYTVVVAAGA SEPATLQFLA
PYTGATIAEY FMYKGKATLV IYDDLSKQAQ AYRQMSLLLR RPPGREAYPG DVFYIHSRLL
ERAAKLSDEL GKGSMTALPI IETQAGDVSA YIPTNVISIT DGQIFLSSDL FNAGIRPAVN
PGISVSRVGS AAQTKAMKKV AGKIKLELAQ FDDLQAFAQF ASDLDKATQD QLARGQRLRE
LLKQSQNQPL SVAEQVAILY AGINGYLDDI PVDKVTTFTK GLRDYLKSGV NPYFQDVQSK
KTLGDDEEKA LKAALDDYKK TFKATA
|
|---|
| |