Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2602 |
Symbol | |
ID | 3681065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 3223643 |
End bp | 3224695 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637717949 |
Product | inner-membrane translocator |
Protein accession | YP_323112 |
Protein GI | 75908816 |
COG category | [R] General function prediction only |
COG ID | [COG4603] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.815607 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCACAA ATAAACGCTT TCAACTCCTG TTACCAATCC TATCACCGCT AATTGCAATT ATCTCTGCTC TCATCGTCGG TGCTATCCTC ATCCTACTTG CTGGGGCAAA TCCCATCACC GCCTACACAG CTTTATTCCA AGAATCCCTT TCTACTTACT TCGGCTTTGG TAACACCCTC ACCAAAATGA CACCCCTCTT ATTCACCAGT TTAGGTGTCT TAATAGCATT AAAGGCTAGT CAATTTAATA TCGGTGGCGA AGGACAAATT TACCTTGGTG CGTTGGGTAG CACTTTAGTT GGGTTATATG TGCAAGGATT ACCTGCTATC ATCCACATTC CTCTAGCACT TGTCGCAGGT TTTGGATTTG GTGCGGTTTG GGGTTGGATA CCCGGCTATC TCAAAGCCGT GGGGGGAGTC AATGAAGTTA TCACCACCCT ATTACTAAAT TACATTGCCA TAAATTTAAT CAGCTACTTG GTGCAGAACC CCTTAAAAGC ACCAGGCGCA CCTAGTCCCT ATTCGCCATT GATTGCTAAA TCTGCACAAT TGCCCATCAT CCTACCCCAA AGTCTAGCCC ATGCAGGTAT CTTACTAGCT TTACTCACTG CCGGACTACT ATGGGTGTTA CTAGGGCGAT CGCCTCTAGG ATACCAAATT TCCGCCGTTG GTTTTAACCC CACAGCCGCC CATTATGCCC GAATTTCCGT CAAAAACACC ATCATGCTAG TAATGTCCTT AGCCGGTGGT TTAGCAGGCT TGGCGGGTGC ATCGGAAGTT ATGGGGTTGA AATATCGCCT ATTTGAACAA GTTTCCCCTG GCTACGGATT TGATGCCATT GCGATCGCCT TCTTAAGTCG CGGTAGTATT AACGGTGTAG TCCTAACTGC TTTATTTTTC GCCGCTTTGC GTAGTGGTGC AAACGTCATG CAACGTAGCG CAGGTGTTCC CGTCACCGTA GTTTACGCCA TCCAAGGATT CACCGTCCTA TTCATCGCCA TCAGCCTCGC CGTAGAAACA CAAATCAAAA CGCAAAGTAA CGCGGAGATT TAA
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Protein sequence | MITNKRFQLL LPILSPLIAI ISALIVGAIL ILLAGANPIT AYTALFQESL STYFGFGNTL TKMTPLLFTS LGVLIALKAS QFNIGGEGQI YLGALGSTLV GLYVQGLPAI IHIPLALVAG FGFGAVWGWI PGYLKAVGGV NEVITTLLLN YIAINLISYL VQNPLKAPGA PSPYSPLIAK SAQLPIILPQ SLAHAGILLA LLTAGLLWVL LGRSPLGYQI SAVGFNPTAA HYARISVKNT IMLVMSLAGG LAGLAGASEV MGLKYRLFEQ VSPGYGFDAI AIAFLSRGSI NGVVLTALFF AALRSGANVM QRSAGVPVTV VYAIQGFTVL FIAISLAVET QIKTQSNAEI
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