Gene Ava_2602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2602 
Symbol 
ID3681065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3223643 
End bp3224695 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content47% 
IMG OID637717949 
Productinner-membrane translocator 
Protein accessionYP_323112 
Protein GI75908816 
COG category[R] General function prediction only 
COG ID[COG4603] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.815607 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACAA ATAAACGCTT TCAACTCCTG TTACCAATCC TATCACCGCT AATTGCAATT 
ATCTCTGCTC TCATCGTCGG TGCTATCCTC ATCCTACTTG CTGGGGCAAA TCCCATCACC
GCCTACACAG CTTTATTCCA AGAATCCCTT TCTACTTACT TCGGCTTTGG TAACACCCTC
ACCAAAATGA CACCCCTCTT ATTCACCAGT TTAGGTGTCT TAATAGCATT AAAGGCTAGT
CAATTTAATA TCGGTGGCGA AGGACAAATT TACCTTGGTG CGTTGGGTAG CACTTTAGTT
GGGTTATATG TGCAAGGATT ACCTGCTATC ATCCACATTC CTCTAGCACT TGTCGCAGGT
TTTGGATTTG GTGCGGTTTG GGGTTGGATA CCCGGCTATC TCAAAGCCGT GGGGGGAGTC
AATGAAGTTA TCACCACCCT ATTACTAAAT TACATTGCCA TAAATTTAAT CAGCTACTTG
GTGCAGAACC CCTTAAAAGC ACCAGGCGCA CCTAGTCCCT ATTCGCCATT GATTGCTAAA
TCTGCACAAT TGCCCATCAT CCTACCCCAA AGTCTAGCCC ATGCAGGTAT CTTACTAGCT
TTACTCACTG CCGGACTACT ATGGGTGTTA CTAGGGCGAT CGCCTCTAGG ATACCAAATT
TCCGCCGTTG GTTTTAACCC CACAGCCGCC CATTATGCCC GAATTTCCGT CAAAAACACC
ATCATGCTAG TAATGTCCTT AGCCGGTGGT TTAGCAGGCT TGGCGGGTGC ATCGGAAGTT
ATGGGGTTGA AATATCGCCT ATTTGAACAA GTTTCCCCTG GCTACGGATT TGATGCCATT
GCGATCGCCT TCTTAAGTCG CGGTAGTATT AACGGTGTAG TCCTAACTGC TTTATTTTTC
GCCGCTTTGC GTAGTGGTGC AAACGTCATG CAACGTAGCG CAGGTGTTCC CGTCACCGTA
GTTTACGCCA TCCAAGGATT CACCGTCCTA TTCATCGCCA TCAGCCTCGC CGTAGAAACA
CAAATCAAAA CGCAAAGTAA CGCGGAGATT TAA
 
Protein sequence
MITNKRFQLL LPILSPLIAI ISALIVGAIL ILLAGANPIT AYTALFQESL STYFGFGNTL 
TKMTPLLFTS LGVLIALKAS QFNIGGEGQI YLGALGSTLV GLYVQGLPAI IHIPLALVAG
FGFGAVWGWI PGYLKAVGGV NEVITTLLLN YIAINLISYL VQNPLKAPGA PSPYSPLIAK
SAQLPIILPQ SLAHAGILLA LLTAGLLWVL LGRSPLGYQI SAVGFNPTAA HYARISVKNT
IMLVMSLAGG LAGLAGASEV MGLKYRLFEQ VSPGYGFDAI AIAFLSRGSI NGVVLTALFF
AALRSGANVM QRSAGVPVTV VYAIQGFTVL FIAISLAVET QIKTQSNAEI