| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2587 |
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| Symbol | |
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| ID | 3680913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 3196314 |
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| End bp | 3197516 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637717934 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_323097 |
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| Protein GI | 75908801 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR02971] ABC exporter membrane fusion protein, DevB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.897533 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGTAA ATAAAGAACG CCAATTATTT ATCAAACCCC AAGGTCGGTG GCGGTTGATT
TTGGCAGCAT CCCTCACCTT AGCTGCTGGG CTAATATCCC TCTATAGTTT GTCCTCCAAT
CGATTTTCCG CACCAGTGAA AACCCCTGTT GCCAATACTC CCAAAGCAGC ACCAGTGAGA
GTTGCTGTCA CCGCTCTAGG ACGCTTGCAA CCACAAGGTC AAATCACTAC TTTATCTGCG
CCTAGTTCCA CCAACGGTAT CCGTGTAGAT AGATTACTGG TGAAAGAAGG TGACGAAGTA
CAAGCAGGAC AAGTATTGGC ATATCTGGAA GACTATAGCC GTGCAACCTC AGCCCTAGAA
CAAGCTTTAG ATAAACTGCA AATTGCCAAA ATCAGACTTG CACAAGTAAA AGCAGGTGCT
AAACCTGGAG ACATTGATGC TCAAAAAGCA ACTGTTGCTC GTTTAGAGTC GCAACTAAAA
GGAGAAGTTG CTACCCAACA AGCAACAATT AATCGGATCA ACGCTGAACT CAACAACGCC
CAAACCGAAA ACGATCGCTA TCAAAAATTA TTCAAAGAAG GCGCTGTTTC TGCATCTGTA
TCTGACAGTA AAGCCTTACA ACTCAAAACT GTTGAACAAC AACTCACAGA AGCCAAAGCC
TCTCTCAGTC GCTCTCAAAA CACCCTAGCT GACCAAATCA AAGAAGCTAA AGCTAAACTC
AGCAGCGTCA AAGAAGTACG GGCTGTAGAT GTAGACTTAG CCCAGATGGA AGTGAGAAGC
GCCGTAACAG CCGTCAAACA AGCCAAAGCC GACCAGGAGT TAACTTACAT AAAAGCTCCC
ATCGATGGCA GAATTTTAAA AACTCATGCC AAAACAGGGG AAGTTATCCC CAGTAGTGGA
TTTGCTGATA TTGGTAAGAC ATCGCAGATG TATGTAATTG CCGAAGTTTA CCAAACTGAC
ATTCAAAAAG TGCGTGTAGG TCAAAAAGCA ACAATTACCA GCACAGCATT TTCTGGCAAA
CTCCAAGGAA CTGTTAAGGA GATTGGTTGG CAAGTTGATA AACAAAGCAT CTTCAGCCTC
AACCCCAGAT CAGATACCGA CCGGAGAATC ATTGAAGTTA AAGTCTCCAT TGACAATCCC
GCAGATAGCG AAAAGGTCGC ACGTTTAACT AACCTACAAG TTGATGTATC AATTCAAATT
TAA
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| Protein sequence | MAVNKERQLF IKPQGRWRLI LAASLTLAAG LISLYSLSSN RFSAPVKTPV ANTPKAAPVR
VAVTALGRLQ PQGQITTLSA PSSTNGIRVD RLLVKEGDEV QAGQVLAYLE DYSRATSALE
QALDKLQIAK IRLAQVKAGA KPGDIDAQKA TVARLESQLK GEVATQQATI NRINAELNNA
QTENDRYQKL FKEGAVSASV SDSKALQLKT VEQQLTEAKA SLSRSQNTLA DQIKEAKAKL
SSVKEVRAVD VDLAQMEVRS AVTAVKQAKA DQELTYIKAP IDGRILKTHA KTGEVIPSSG
FADIGKTSQM YVIAEVYQTD IQKVRVGQKA TITSTAFSGK LQGTVKEIGW QVDKQSIFSL
NPRSDTDRRI IEVKVSIDNP ADSEKVARLT NLQVDVSIQI
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