Gene Ava_2585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2585 
Symbol 
ID3680911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3193954 
End bp3194955 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content41% 
IMG OID637717932 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_323095 
Protein GI75908799 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.297924 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTGC AAAATAAAAC TCTGCTGATT ACTGGGATTG ATGAATTTAT CGGTTTGCGT 
GCAGCTGAGT TGGCGATCAC CCAGGGAATG AAAGTGCGTG GACTGCAAAC TTCCACTAAT
AAAGATAAAG CGCAGAAATT AGGCGCTGAG GTGATTGTTG GTAGTATCAC TGATGCAGCG
ATCGCCCACA AGGCTTGTCA AGGAGTGGAC ATTGTTCTAC ATACAGAACA ATTGACAGAA
GAAGCAGGCC CCATCAAGAA TTTTCGGGAA ATTAATGTGA ATGGTGCAGT CAATATGGCT
AAGGCTGCCA AAAATGCTGG TGTGAAATGC TTTGTGCATC TTTCCAGCGT TATGGTTTAT
GGGTTTAATT ATAGCGATCG CATCACTGAA TCTGGGACAC TCTCCGGTGA TAACAATCCC
TATTGTCAAA CCAAAATCGA AGCTGAAACC GAACTTTTAC CCCTAAATTC TCCACCCGAT
TTTGGCTTAA TTATCATTCG CGCTGGAGAT ATTTACGGGC CGGGAAGTAT TCCCTGGATA
GTCAGACCAA TATTAATGAT GCGGCAGAAA TTATTCGCCT ATGCTAACGA AGGTCAAGGA
GTTATCAATC ATGTGTATAT CGATAACTTA ATTGATGCCA TCTTTTTAGC AGTAGAAAAA
GATGCCTATG GTGAAATCTT TAATATCACC GATGGCGAAG AAACTTCTTG GAAAGAATAC
TTCATGCGCC TAGCGGCAAT GGAAGGTGCA TCTGCCCCTA TGTCTATCCC AAAGGATGAA
ATGAAGTTGT TTTTAAAACT GCGAAATCAG GGACAAAAAC TATTTCGCAA AAAAGCCGAT
ATCCTGCCAG AATCAGTGGA CTTCATGACT CGTCCCTATG CCTATTCCAT CACTAAAGCC
CAAACAATAT TAGACTATAA ACCAAAAGTT GACCTAGAAC AAGGTTTAAG TCAAACAAAA
ATTTGGTTGC AAAATACCGA CATTCAAAAG TTAGTTAAAT AG
 
Protein sequence
MDLQNKTLLI TGIDEFIGLR AAELAITQGM KVRGLQTSTN KDKAQKLGAE VIVGSITDAA 
IAHKACQGVD IVLHTEQLTE EAGPIKNFRE INVNGAVNMA KAAKNAGVKC FVHLSSVMVY
GFNYSDRITE SGTLSGDNNP YCQTKIEAET ELLPLNSPPD FGLIIIRAGD IYGPGSIPWI
VRPILMMRQK LFAYANEGQG VINHVYIDNL IDAIFLAVEK DAYGEIFNIT DGEETSWKEY
FMRLAAMEGA SAPMSIPKDE MKLFLKLRNQ GQKLFRKKAD ILPESVDFMT RPYAYSITKA
QTILDYKPKV DLEQGLSQTK IWLQNTDIQK LVK