Gene Ava_2583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2583 
Symbol 
ID3680909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3192011 
End bp3193270 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content42% 
IMG OID637717930 
Productglycosyl transferase family protein 
Protein accessionYP_323093 
Protein GI75908797 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.8679 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAGT TGGCAATTTT CTTGTCTAAG TCTTTGCTGG GGTGGTTAGT TATTCAGATG 
TGTCTTTCGT TAGTATTTTT GCTGTATGTG CGGACATGGC GGTCTAAAAA CATACCTGAT
GAGCAGTTAC CAAAAGCGGC GGTAATTATT TGTTTACGGG GAGCAGACCC TTTTTTACCC
AACTGCTTAG AAGCATTATT ACAGCAAAAT TACCCAAATT ACGATTTAAA GGTAGTTGTT
GATAGTCAGG ATGACCCTGC TTGGAAGATT GCTAGTGATA GCATCGATAA ATTAGCCGCA
ACTAACGCTC AAATTAACCA TTTGCGAGTT ATTCGCCACA ACTGTAGTCT TAAGTGCAGT
TCTCTAATTC AAGCTATTTC CGATTTGGAT GATTCTTATC AAGTAGTTGC TTTAGCCGAT
GCAGATACAA TCGTTCATCC TCATTGGTTG CGGGAATTAG TTAGCCCTCT GGGTGACCCC
AAAATTGGGG CGACGACTGG TAATCGTTGG TATGTTCCTA CTAACCGCTA TTGGGGTTCT
TTGGTACGTT ACACCGGGAA TATAGCTACT GTTGTGCAGA TGTACCTATT TGGTATTCCC
TGGGGTGGGA CTCTAGCTGT GAAAACACAG GTGTTGCGTC AAACAGGACT GCTGGAAAAG
TGGGCGCAAT CCTTTGGCGA GGATTTAATG ATGCCCAATG TGCTGAAAAA GCATGGTTTA
CGGGTTAAAT TTGTGCCTTC TTTGATTATG GTTAATCGTG AAGAGTGCGA TTTGTTGGGA
ATTATCGAAT ATCTCCAGCG CTTTCTGCTT TATTCTCGGC TTTATCATCC CCAGTGGCTA
GCTATAGTTA GTGAAGCTGT TTCTAGCATT TTGTTCCCCA CTTTAAGCAT TATTGTGTTT
CTGTTGTCTT TGGGTGATGC TCAATGGGAT GTAGCAGGTT TATTGTTAAA TTCCTACAGC
ATTTATACCC TGGGATTGCT CTTACTCATG GTGGTGATGG AGATAGGGCT ACAACCAGTA
ATTTGTGCTC AAGGTCAGCC AGGGACACAG TTATCAATTA CCAGGATGGG CAAAATGTTA
CTAGCAATTC CCCTAACACA ATGGGTGTAT GGGTTAGCAA TGCTATCTTC TGTGTGGATA
TCAACTGTTA AATGGCGGGG TATTATTTAT CGGATTCATA GCCATGACGA TATCCGCTTA
GTTGAGTATC ATGCCTATGA TTTTTTGGAT CAACCTATTG ATAGCAAAAT GTCTCTGTGA
 
Protein sequence
MKELAIFLSK SLLGWLVIQM CLSLVFLLYV RTWRSKNIPD EQLPKAAVII CLRGADPFLP 
NCLEALLQQN YPNYDLKVVV DSQDDPAWKI ASDSIDKLAA TNAQINHLRV IRHNCSLKCS
SLIQAISDLD DSYQVVALAD ADTIVHPHWL RELVSPLGDP KIGATTGNRW YVPTNRYWGS
LVRYTGNIAT VVQMYLFGIP WGGTLAVKTQ VLRQTGLLEK WAQSFGEDLM MPNVLKKHGL
RVKFVPSLIM VNREECDLLG IIEYLQRFLL YSRLYHPQWL AIVSEAVSSI LFPTLSIIVF
LLSLGDAQWD VAGLLLNSYS IYTLGLLLLM VVMEIGLQPV ICAQGQPGTQ LSITRMGKML
LAIPLTQWVY GLAMLSSVWI STVKWRGIIY RIHSHDDIRL VEYHAYDFLD QPIDSKMSL