| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2567 |
|---|
| Symbol | psaB |
|---|
| ID | 3679590 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 3173015 |
|---|
| End bp | 3175243 |
|---|
| Gene Length | 2229 bp |
|---|
| Protein Length | 742 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637717913 |
|---|
| Product | photosystem I P700 chlorophyll a apoprotein A2 |
|---|
| Protein accession | YP_323077 |
|---|
| Protein GI | 75908781 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01336] photosystem I core protein PsaB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0839858 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTACAA AATATCCTAA ATTTAGCCGG GATCTGGCTC AAGATCCGAC TACGCGTCGA
ATTTGGTATG CGATCGCCAC GGGAAATGAT TTTGAAAGTC ATGATGGCAT AACTGAGGAA
AATCTCTACC AAAAGATTTT CGCTACTCAC TTCGGTCATG TCGCCATCAT TTTCTTGTGG
GCATCAAGTC TTCTGTTCCA CGTCGCCTGG CAAGGTAACT TTGAACAGTG GATAAAAGAT
CCACTCCATA TTCGCCCCAT TGCCCATGCC ATTTGGGACC CCCATTTTGG TGAACCAGCC
ATAGAGGCTT TTAGCCAAGG TGGTGCTAAC TATCCCGTAA ATATTGCTTA CTCTGGTGTT
TATCACTGGT GGTATACCAT CGGGATGCGG ACGAATAACG ACCTTTACCA AGGTTCTATT
TTCCTGTTGC TTTTAGCAGC CTTATTTTTA TTCGCAGGTT GGCTACACTT GCAACCCAAA
TTTCGTCCTA GCTTGACTTG GTTTAAGAGT GCTGAACCTC GTCTGAATCA CCACTTAGCT
GGTTTGTTTG GTGTTAGTTC CTTGGCTTGG GCCGGTCACT TGATTCACGT CGCCATCCCC
GAATCTCGTG GGGTTCATGT GGGTTGGAGA AACTTTCTGA CTACTTTGCC TCACCCAGCA
GGTTTAACAC CATTCTGGAT GGGTAACTGG GGTGTGTATG CCGAAAATGC AGATACGACC
GGGCATATTT TCGGCACATC CCAAGGTGCA GGAACCGCTA TTTTGACTTT TTTGGGTGGT
TTCCATCCCC AAACTGAATC GCTGTGGTTG ACTGATATGG CGCATCACCA TCTAGCGATC
GCTGTTATCT TTATCATTGC CGGGCATATG TACCGGACTA ACTTTGGCAT TGGTCACAGC
ATCAAAGAGA TGCTGAACGC CAGACAATTC TTTGGTATCC GTACTGAAGG ACAGTTCAAC
TTACCCCATC AAGGGTTATA CGACACTTAT AACAACTCCT TGCACTTCCA ATTATCCATA
CACTTGGCAG CGTTAGGGAC TGCGTTGTCG TTAGTGGCGC AACATATGTA CTCGCTGCCG
CCTTACGCCT TTATAGCAAA GGACTTTACA ACACAGGCGG CGCTATATAC CCATCACCAG
TACATTGCTG GGTTCTTGAT GGTTGGCGCG TTTGCCCATG CTGGTATTTT CTGGGTACGA
GACTACGACC CAGAACAAAA TCAAGGTAAC GTCCTTGACC GTGTACTGAA GCATAAAGAA
GCGATTATCT CTCACCTAAG TTGGGTGTCG CTTTTCTTAG GCTTCCATAC TCTAGGACTA
TACGTTCACA ACGATGTTGT AGTTGCCTTT GGCACTCCAG AAAAGCAAAT TTTGATTGAG
CCGGTGTTTG CTCAATTCAT CCAAGCTGCT CATGGCAAAC TGCTTTATGG GATGGATACT
TTATTATCTA ACCCAGATAG TATTGCTTAT ACAGCTTGGC CAAACCACGC TAACGTCTGG
TTGCCAAACT GGCTAGAGGC GATTAACTCC GGCACTAACT CTTTATTCTT GACCATTGGC
CCTGGTGATT TCTTGGTACA CCATGCGATC GCTCTCGGTT TGCATACCAC CACCTTGATT
TGTGTTAAGG GTGCGTTGGA TGCCCGTGGT ACTAAGCTGA TGCCCGATAA GAAAGACTTC
GGCTTCACCT TCCCCTGTGA TGGGCCTGGC CGTGGTGGTA CTTGCCAAAC CTCCTCTTGG
GAACAGTCTT TCTATCTGGC TCTCTTCTGG ATGTTGAATC TCCTGGGCTG GGTAACTTTC
TACTGGCATT GGAAGCATCT TGGGGTTTGG CAAGGTAACG TTGCTCAGTT CAACGAAAAC
TCCACATACC TGATGGGTTG GTTCCGTGAT TACCTCTGGG CTAATTCGGC TCAGTTAATT
AACGGTTACA ATCCCTACGG CACAAATAAT TTGTCTGTCT GGGCTTGGAT GTTCCTGTTT
GGACATTTAG TTTGGGCTAC CGGTTTCATG TTCCTGATTA GCTGGCGTGG GTACTGGCAA
GAGTTAATTG AAACTCTAGT TTGGGCGCAC GAGCGCACGC CCCTAGCTAA CTTAGTTCGT
TGGAAAGATA AGCCAGTGGC TCTATCTATT GTGCAAGGTT GGTTAGTCGG TTTAGCTCAC
TTTACCGTTG GTTACATCCT TACCTATGCA GCATTCCTTA TAGCCTCAAC GGCTGGTAAA
TTTGGTTAA
|
|---|
| Protein sequence | MATKYPKFSR DLAQDPTTRR IWYAIATGND FESHDGITEE NLYQKIFATH FGHVAIIFLW
ASSLLFHVAW QGNFEQWIKD PLHIRPIAHA IWDPHFGEPA IEAFSQGGAN YPVNIAYSGV
YHWWYTIGMR TNNDLYQGSI FLLLLAALFL FAGWLHLQPK FRPSLTWFKS AEPRLNHHLA
GLFGVSSLAW AGHLIHVAIP ESRGVHVGWR NFLTTLPHPA GLTPFWMGNW GVYAENADTT
GHIFGTSQGA GTAILTFLGG FHPQTESLWL TDMAHHHLAI AVIFIIAGHM YRTNFGIGHS
IKEMLNARQF FGIRTEGQFN LPHQGLYDTY NNSLHFQLSI HLAALGTALS LVAQHMYSLP
PYAFIAKDFT TQAALYTHHQ YIAGFLMVGA FAHAGIFWVR DYDPEQNQGN VLDRVLKHKE
AIISHLSWVS LFLGFHTLGL YVHNDVVVAF GTPEKQILIE PVFAQFIQAA HGKLLYGMDT
LLSNPDSIAY TAWPNHANVW LPNWLEAINS GTNSLFLTIG PGDFLVHHAI ALGLHTTTLI
CVKGALDARG TKLMPDKKDF GFTFPCDGPG RGGTCQTSSW EQSFYLALFW MLNLLGWVTF
YWHWKHLGVW QGNVAQFNEN STYLMGWFRD YLWANSAQLI NGYNPYGTNN LSVWAWMFLF
GHLVWATGFM FLISWRGYWQ ELIETLVWAH ERTPLANLVR WKDKPVALSI VQGWLVGLAH
FTVGYILTYA AFLIASTAGK FG
|
|---|
| |