| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2565 |
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| Symbol | |
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| ID | 3679588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 3168931 |
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| End bp | 3171486 |
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| Gene Length | 2556 bp |
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| Protein Length | 851 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637717911 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_323075 |
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| Protein GI | 75908779 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4995] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTTTC CCATCAAAAA AAATCCTTGG CTTTATCTGT GCTTAAGTAT TCTGAGCTTT
TGTTTAGCGG TAACCATCAC TCCTGCAAAA GCATCCATAC CGTTACAGAC AACTCTCAAT
GTGTCATTAT CCACTCCTCA AACTACCAAC GGGTTAGAAC AAGGACGAAA CCTCTACCAT
GCAGGACGTT TTGCGGAAGC TGCTACAACA TGGCAAACGG CTGCACAGAG ATATCATATC
CAAGGCGATC GCACTAATGA AGCTCTCAGC TTGAGTTACT TATCATTAGC ACAACAGGAA
CTCAATCAGT GGGACATCGC CAGACAATCT ATCGAGCAAA GTGTGAAAAT TCTGCAAACG
GCTCAACCTT CTGTTGATGC GATTATCTGG GCGCAGATAT TAAATACTCA GGCAAATTTA
CAATTACGTA CTGGCAAAGC GGAAAACGCG CTGGAAATTT GGCAACAAGC TCAAAAATAT
TATGAACAAG CAGGCGACAA TGTGGGCAGC TTGGGTAGTC AAATCAATCA AGCACAAGCC
TTACAAAGCT TGGGATTTTA TCGCCGCTCG AAACAACAAT TGGAGATATT AACGCAAAAG
CTACAAGAAA TGCCAGATTC GGAAGTTAAA GTGAGTGGGT TGCGATCGCT AGGTTTAACG
TTGCACGCGA TCGGTGATAA TAAAAGTCAG CTAATTTTAG AACAAAGTTT AGCCACCGCC
AATAAAATCG ACGCTAAAAC TCATTTAAGT TCTATTCTTG CGAGTCTGGG GAAAGTTGCC
TCTGACTTCC AAGATCCAGA AGTGGCATTA AATTACTTTG AAGACGCAGA AAAAGTAGCC
ACCAATCCAA ATGAATCCTT GCAAGCGCGT TTAGCTCGGT TCAAATTATT GATAGATTAC
GACAAACTAG AATATGCAGT TCCCCTAGCA CCTCAATTAC AACAACAGTT ATCAGAACTA
CCACCCAGCC ATAGCTCACT CTACGCAGCC ATTAATTTTG TGGCTACATT GAATCGCTTG
GAAAAACCTG ACCAAGTTTT ACCAATTAAA GATTTGGCAC AACTGATGGC ATTGACTGTT
AAGTCTGCAC AACAGATTGA AGATTCTCCA GCCCAAGCTT ATGCACTGTA TCAGTGGGGG
CAACTCTACC GTCGGACAAA GCAGTGGACG GAAGCCAAGG AAGTAGCCCA ACAATCCCTC
AATATTGCCC GTCAACTCCA AGCTGACGAC ATCATCGCTC AATCAGCATG GCAAGTAGGA
CAGTTGTTTA AGCAACAGGG CGATCGCCCA AAAGCGATTA CAGCTTATAC GGAAGCAGTT
AAGTCATTAA AAGCATTGCG GGGAGATATG GTTGCAGTGA ACCCGGAGGT TCAATTTTCT
TTCCGCGAAA GTGTAGAGCC TGTCTATCGG GAGTTAGTAG GTCTACTTCT AGAAGAACAA
CCAACCCAGA CTGCTTTAAT GCAGGCTCGT GAATTGATCG AATCGTTACA AATTGCTGAA
CTTGATAACT TTTTCCGCGA AGCTTGCTTA GATAAAGCCC AGCAAATTGA CAAAGTTGAC
CCAACCGCGA CGGTTATTTA TCCGATTATT CTCAGCGATC GCCTAGCGGT GATTCTCTCC
CAAGCTGGAC AGCCTCTGCG TTACTATGTA ACCCGTAAAT CTCAAGCTGA TATCGAACAA
ACTCTTGATA ATTTGTTAGT AGCCCTCAAC CCTGTTTCCA ATTCCCAAGA CAGGGTGCGA
TTGTCTCAAC AAGTGTATGA TTGGCTGATT CGTCCGGCAG AAGCAGAACA AGCATTTAAA
AATACTAAAA CACTAGTATT TGTTTTAGAT GGCAAGTTGC GGAATATACC AATAGCTGCT
CTGTTCGATG GACACCAATA TCTGATCGAG AAATATGCAG TGGCTCTCTC ACCAGGGTTG
CAATTAATAG CTGCTCAATC CCTGGAGCAA AACAAAATTA AGGCAATCAT CGGTGGTATT
AGCGAATCCC GCTCTGGTTT TGCTGCCTTA CCTGCCGTGG AATCAGAAGT GAAGCAAATC
TCTCAGACAA TAGCTTCTTC TATGCTATTG AACCAGAAAT TCACCAGTCA AGCCCTAGCA
GATCGTATCA AGTCTAGCTA TGCCGATGTC GTTCACCTCG CTACCCACGG ACAGTTCAGC
TCCCGTATCG AAGATACTTT TTTATTGACT TGGGATGGAC AAGTAAATGT CAAAGAGTTG
TCTGAACTAC TCAAGAATCG TAGTGGTGAT TCATCAAAAG CGATCGAATT ATTGGTACTA
AGTGCCTGCG ATACTGCAAC TGGAGATGAT CGCGCCGTTC TGGGACTGGC AGGCTTAGCG
GTCAAATCCG GCGCTCGCTC AACTATTGCC ACCCTCTGGC CTGTCAAAGA TAAAGCTGCT
GAAATGCTGA TGACGCGCTT CTATGACCAA CTACGAAAGC CAAAAATCAC CAAAGCCGAA
GCATTGAGGC AAGCCCAAAT CAACCTGATT CATCAAACTG ATTTCCAAGA TCCTTTCTTT
TGGTCTGCTT TCGTTCTGGT TGGTAACTGG CTTTAA
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| Protein sequence | MIFPIKKNPW LYLCLSILSF CLAVTITPAK ASIPLQTTLN VSLSTPQTTN GLEQGRNLYH
AGRFAEAATT WQTAAQRYHI QGDRTNEALS LSYLSLAQQE LNQWDIARQS IEQSVKILQT
AQPSVDAIIW AQILNTQANL QLRTGKAENA LEIWQQAQKY YEQAGDNVGS LGSQINQAQA
LQSLGFYRRS KQQLEILTQK LQEMPDSEVK VSGLRSLGLT LHAIGDNKSQ LILEQSLATA
NKIDAKTHLS SILASLGKVA SDFQDPEVAL NYFEDAEKVA TNPNESLQAR LARFKLLIDY
DKLEYAVPLA PQLQQQLSEL PPSHSSLYAA INFVATLNRL EKPDQVLPIK DLAQLMALTV
KSAQQIEDSP AQAYALYQWG QLYRRTKQWT EAKEVAQQSL NIARQLQADD IIAQSAWQVG
QLFKQQGDRP KAITAYTEAV KSLKALRGDM VAVNPEVQFS FRESVEPVYR ELVGLLLEEQ
PTQTALMQAR ELIESLQIAE LDNFFREACL DKAQQIDKVD PTATVIYPII LSDRLAVILS
QAGQPLRYYV TRKSQADIEQ TLDNLLVALN PVSNSQDRVR LSQQVYDWLI RPAEAEQAFK
NTKTLVFVLD GKLRNIPIAA LFDGHQYLIE KYAVALSPGL QLIAAQSLEQ NKIKAIIGGI
SESRSGFAAL PAVESEVKQI SQTIASSMLL NQKFTSQALA DRIKSSYADV VHLATHGQFS
SRIEDTFLLT WDGQVNVKEL SELLKNRSGD SSKAIELLVL SACDTATGDD RAVLGLAGLA
VKSGARSTIA TLWPVKDKAA EMLMTRFYDQ LRKPKITKAE ALRQAQINLI HQTDFQDPFF
WSAFVLVGNW L
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