| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2563 |
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| Symbol | |
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| ID | 3679586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 3164785 |
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| End bp | 3167592 |
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| Gene Length | 2808 bp |
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| Protein Length | 935 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637717909 |
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| Product | periplasmic sensor hybrid histidine kinase |
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| Protein accession | YP_323073 |
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| Protein GI | 75908777 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG4252] Predicted transmembrane sensor domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.851477 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGCGCA AATTCCAAGC TTTCATCCAG CGCACTCGCA CTGTCTTGAT TATTACGCCT
AGTGTTGCCT TAACGATTAT TGTCGGACAA TCGTTAGGAA TTTTCAATTT GCTTGAGTGG
AAACTTCGTG ATGAATGGGT GCGACTGCGT TCGTGTGAAG CAAATACCCT TCTGGTGTGT
TCCCACAATA CAATAGCTGA CGAAATCATC ATTGTCACAA TTGATGAGCG GGATATCCAA
TCAGTTGGTA AATGGCCGAT TCCAGATAGC TCACTGGCAG AGTTACTAGA AAAAATCCGA
TCGCAACAAC CCCGTGCCAT TGGCTTGGAT CTGTATCGGG ATTTACCAGA AGGTAAAGGC
CATGAACAAC TCGTGGAAGT TTTCCATACT ACGCCCAATT TGATTGGAGT TGAGAAAATC
ACTGGTGAGC GTGTCAATCC GCCACCTGCA CTGAAAAAAA ATGACCAAAT AGGATTAGCT
GATTTGGTGT TGGATGGCGA TCGCCATGTG CGTCGCGCCC TCTTGACTGC GGTCGATACC
CAAGAAGAAG GTAAAATCAA AGCCGGACTA GCAACTCTTG TAGCGCTCAA ATACCTAGAA
GCCGAAAAAA TCACCTTAGA ATCAGTTGAT GCCAAACAGC AGAAGTTTCG CTTGGGTAAG
CAAATACACT TACCACTACA AAATTTAAGT GCGGGTTATA CGGATTCTGA CTTAGGTGGG
TATCAAATTT TACTTAACTG GTACGGCTCA GAAGCAGCCT TTCGCACAGT TACCATGCGC
CATGTGTTGG CAGGGAAAAT TCCTCCAGAA CTGATGCGCG ATCGCATGGT TTTTATCGGT
TCAACTGCTG CCAGTACCAA CGATTTCTTT AGTACACCTT TTAGCTCCTC CTTGATGTCT
GCTCAAAAAC CTACACCAGG TGTTGTGATC CATGCCAATA TTGCTCATCA ACTGGTACGA
GGGGCAAGAA CAGGGAAAGC GAATCTACGT GGTGTTTCTG GATTGTCTAT GGCGGGCTGG
ATTATTTTAT GGTCTGTGAT CGGTTCTAGC GGTAGTTGGT TGTTAGCTAG CGCACGCAGT
GGACGAAGGA TTCCAGGCGG AAAAATTCTT TGGACAACCA CATCCATCAG TGGGGCATTT
CTGGGAGGTG GCTATGGAAT GTTTCTGCAT GGTGTTTTGA TTCCGGTCAC ACCCCCCTTA
GCCGCTTTCA TCGTTAGTGT GATTGCCACA ACTAATGCCT ATAAACAGCA GAAGTTAGAA
GAAGCAAATC AGCAATTAGA AATTGCCAAT AGCCAACTTT TAGATTATTC CAAAACCCTA
GAGTTAAAAG TCCAAGAACG GACTCATGAA CTACTGGAAG CCAAGCAAGC TGCCGACGCT
GCTAACCAAG CTAAAAGTGA GTTTCTGGCA AATATGAGCC ACGAACTACG CACACCACTG
AATGGCATCC TTGGTTTTGC TCAGGTGCTA GAGGTATCAC CGAATCTGAA AGAGAAAGAC
TTAGAGGGAG TGAACATTAT TCACCAATGT GGCTCACATC TTTTGCTACT GATTAATGAC
ATTCTTGACT TGTCAAAAAT TGAAGCTCGT AAATTAGAGT TGGTGGAGGC TAATGTACAT
CTGCTAACTT TCTTACATGG TGTGAGCGAG ATTTGTAGTA TCCGAGCAGC GCAAAAGGGG
ATTGCATTTA AAGTCTCCGT GGGCGATCGC CTACCAACAG TCATAGAGGT GGATGAAAAA
CGCCTAAGGC AAGTGTTGAT CAATTTACTA GGTAATGCTG TCAAATTTAC GGATAGCGGC
GAGGTGGCTT TTAAAGTAGA GTTACTAGAC ACTCAAGATC AGGATAATCA ACAATCCTCT
GTTGCCAAAC TTCGTTTCCA GATTGAAGAT ACAGGCGTGG GTATGTCCCC AGAGCAGCTA
GAGAAAATCT TCTTGGCTTT TGAGCAAGTA GGTGATTACA GACGGCAATC TGAAGGTACT
GGTTTAGGAT TAGCCATCAG TCAAAGAATT GCCGAATTAA TGGGTAGCCA AATTCAGGTA
CAGAGTCGCC TGGGTGAAGG AAGTATCTTC TGGTTGGATT TGACACTTCC AGTGCCAATT
GCCCATGATT GGCAGACCTA CGCCCCAACG CACCAGAAAA TCATTGGTAT TCAGGGTAAC
GCGCCGCAAA TTTTGATTGT CGATGATGAT GACAACCACC GTTCTATGTT GAACAGTCTG
CTACAAGAAA TTGGCTGTCA AACCCTAGAA GCAAGCGACG GCAAACAAGG ACTACAGATG
GCACATGAAC ATCATCCGGA TTTGATTCTG CTTGATTTAG CTATGCCTAA TATGGATGGC
TTTGAGCTAA TGGTTCAGCT ACAAGAGAAT CCACAAACTA GTTCTATCCC CATCATTGTC
TCTAGTGCCA GCGTATTCGA GGAAAATCGC CAACGGAGTT TGCAGGCTGG AGCAACAGCG
TTTTTGCCGA AACCTTTACA AATTGATGAA CTATTCAATG CGCTGCGATC GGTACTCCAA
GTCGAGTGGA TTTATACCCC ATCTGCATCT TTGTCTTTAT CTCCTCAACC AGAACATACA
ACTCATACTG AATTGGTTTT GCCATCACAG GATGTTTTGC AAGAACTCTA TCATCTGGCC
ATGATGGGGG ATATACCAGC GATTGAGGGA ATTCTTAGAG AGCTAATTCA GCATAATAGT
CAGCTAGCTC CCTTCGCCAC TGAGTTGAGT AAACTCACTA CCAACTTCCA AACCGCAAAA
ATTCGCCAGT TCCTGAAATC ATTCGTTATA ACGGAGTCGC ATCCATGA
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| Protein sequence | MWRKFQAFIQ RTRTVLIITP SVALTIIVGQ SLGIFNLLEW KLRDEWVRLR SCEANTLLVC
SHNTIADEII IVTIDERDIQ SVGKWPIPDS SLAELLEKIR SQQPRAIGLD LYRDLPEGKG
HEQLVEVFHT TPNLIGVEKI TGERVNPPPA LKKNDQIGLA DLVLDGDRHV RRALLTAVDT
QEEGKIKAGL ATLVALKYLE AEKITLESVD AKQQKFRLGK QIHLPLQNLS AGYTDSDLGG
YQILLNWYGS EAAFRTVTMR HVLAGKIPPE LMRDRMVFIG STAASTNDFF STPFSSSLMS
AQKPTPGVVI HANIAHQLVR GARTGKANLR GVSGLSMAGW IILWSVIGSS GSWLLASARS
GRRIPGGKIL WTTTSISGAF LGGGYGMFLH GVLIPVTPPL AAFIVSVIAT TNAYKQQKLE
EANQQLEIAN SQLLDYSKTL ELKVQERTHE LLEAKQAADA ANQAKSEFLA NMSHELRTPL
NGILGFAQVL EVSPNLKEKD LEGVNIIHQC GSHLLLLIND ILDLSKIEAR KLELVEANVH
LLTFLHGVSE ICSIRAAQKG IAFKVSVGDR LPTVIEVDEK RLRQVLINLL GNAVKFTDSG
EVAFKVELLD TQDQDNQQSS VAKLRFQIED TGVGMSPEQL EKIFLAFEQV GDYRRQSEGT
GLGLAISQRI AELMGSQIQV QSRLGEGSIF WLDLTLPVPI AHDWQTYAPT HQKIIGIQGN
APQILIVDDD DNHRSMLNSL LQEIGCQTLE ASDGKQGLQM AHEHHPDLIL LDLAMPNMDG
FELMVQLQEN PQTSSIPIIV SSASVFEENR QRSLQAGATA FLPKPLQIDE LFNALRSVLQ
VEWIYTPSAS LSLSPQPEHT THTELVLPSQ DVLQELYHLA MMGDIPAIEG ILRELIQHNS
QLAPFATELS KLTTNFQTAK IRQFLKSFVI TESHP
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