Gene Ava_2561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2561 
Symbol 
ID3679465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3161811 
End bp3162878 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content40% 
IMG OID637717906 
Productglycosyl transferase, group 1 
Protein accessionYP_323070 
Protein GI75908774 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCG CTCAAGTTGC CCCCTTATGG GAACGAGTTC CACCTCCCAG TTATGGAGGT 
ATTGAACTAG TAGTAAGTCA CTTGACAAAC GAACTAGTTC GTCGTGGTCA TGAGGTAACA
TTATTTGCCT CTGGCGATTC TCAAACCTTG GCACATTTAG AAACAGTTTG TCCGCGTGCA
TTGCGCTTAG ACAAAAATGT TCAAGACTAT GCCGCTTATG AAACTTTAGA ACTGAGCCAA
GTTTACCAGA ACGCGACGGA ATTCGATATT ATCCATTCTC ATTTAGGGAT TTCGGCTTTA
CCTTTAGCGA ACTTGGTAAA AACCCCTACA GTACATACGC TGCATGGACA TTTTACCAAA
GATAACCAAA ACGTCTTTAG TCATCATCAT CAACAACCAT ACGTTAGTAT TAGCAACGCC
CAGCGTCAAA TTCATCTCAA CTATATAAAA ACCGTTTATA ACGGTATTGA GCCAAAAGAT
TATCCGTTCA TTTCTCAACC AAAAGAGCCG CCATATCTAG CATTTTTAGG ACGCTTTTCT
CCAGAAAAAG GCCCACATCA GGCGATCGCG ATCGCTAAGC AGAGTGGTTG GCGTTTAAAG
ATGGCAGGAA AAGTTGATAT AGTAGATGCC AAGTTTTTTG AACAAGAGAT TCTTCCTCAT
ATAGATGGTC AGCAAATTGA ATATTTAGGC GAAATTAACC ATACAGAAAA AGCTGAACTA
CTAGGCAATG CTGCTGCTAC TCTTTTTCCG ATCAATTGGC AAGAACCTTT TGGTTTAGTG
ATGATTGAAT CAATGGCAAC TGGTACGCCA GTCATAGGGA TGAATTTAGG TTCTGTACCT
GAGGTGATCG ACCAAGGCAA AACAGGTTTT ATCTGCCGAA CTTATGAAGA AATGATTCAG
ATGATAGCTG TTACCTTGGA ATTAGATCGT CGAGATTGTA GAGAATCCGT AGTCAACAAA
TTTAGCGTTA GCCACATGGT TGATGGGTAT GAAGCGGTAT ATCAACAAAT TATCAAAGAC
CGCGTTAACT TAAACGGTTA TATCCACACA GCTAAAATCC GATTTTAA
 
Protein sequence
MKIAQVAPLW ERVPPPSYGG IELVVSHLTN ELVRRGHEVT LFASGDSQTL AHLETVCPRA 
LRLDKNVQDY AAYETLELSQ VYQNATEFDI IHSHLGISAL PLANLVKTPT VHTLHGHFTK
DNQNVFSHHH QQPYVSISNA QRQIHLNYIK TVYNGIEPKD YPFISQPKEP PYLAFLGRFS
PEKGPHQAIA IAKQSGWRLK MAGKVDIVDA KFFEQEILPH IDGQQIEYLG EINHTEKAEL
LGNAAATLFP INWQEPFGLV MIESMATGTP VIGMNLGSVP EVIDQGKTGF ICRTYEEMIQ
MIAVTLELDR RDCRESVVNK FSVSHMVDGY EAVYQQIIKD RVNLNGYIHT AKIRF