| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2553 |
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| Symbol | rplA |
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| ID | 3679458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 3154443 |
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| End bp | 3155159 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637717899 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_323063 |
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| Protein GI | 75908767 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000296242 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAAAGA AAGTATCACG GCGCTTGCGA GAGTTGCAAG CAAAAGTTGA AGATAGAGAA
TACGGGCCTT TAGATGCTCT GAGCCTGTTG AAAGAGACAG CCACAGCAAA ATTTGCCGAA
GCTGCGGAAG CGCATATCCG CTTAGGTATT GATCCAAAAT ATACAGACCA ACAATTACGG
ACGACAGTTG CATTACCAAA AGGTACAGGG CAAATTGTGC GAGTAGCCGT AATTGCTCGT
GGGGAAAAAG TTACAGAAGC CTCTAACGCT GGTGCTGATG TATTTGGTTC GGAAGAACTG
ATTGACGAAA TCCAAAAAGG CCGCATGGAT TTTGACAAGT TGATTGCCAC ACCAGATGTC
ATGCCACAGG TAGCAAAACT TGGTAAGATG TTAGGCCCTC GCGGTTTAAT GCCCTCACCA
AAAGGTGGTA CGGTGACATT TGACATAGCA AGTGCGATCG CTGAATTTAA AGCAGGTAAG
CTAGAATTCC GGGCTGACCG TACAGGCATT GTTCATGTTA TGTTTGGTAA GGCATCCTTC
TCGCCAGAAG ATTTATTGGT AAACCTGAAG GCGTTGCAAG AGACGATTGA TCGTAACCGT
CCTTCGGGAG CCAAAGGTCG CTACTGGCGC ACATTTTATG TGTCTGCCAC AATGGGGCCA
TCTATTAGAG TCGATATTAA CGCTCTGAGA GATTATAAAC TGACTGAAGC TGCATAA
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| Protein sequence | MTKKVSRRLR ELQAKVEDRE YGPLDALSLL KETATAKFAE AAEAHIRLGI DPKYTDQQLR
TTVALPKGTG QIVRVAVIAR GEKVTEASNA GADVFGSEEL IDEIQKGRMD FDKLIATPDV
MPQVAKLGKM LGPRGLMPSP KGGTVTFDIA SAIAEFKAGK LEFRADRTGI VHVMFGKASF
SPEDLLVNLK ALQETIDRNR PSGAKGRYWR TFYVSATMGP SIRVDINALR DYKLTEAA
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