Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2552 |
Symbol | rplK |
ID | 3679457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 3153893 |
End bp | 3154318 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637717898 |
Product | 50S ribosomal protein L11 |
Protein accession | YP_323062 |
Protein GI | 75908766 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0080] Ribosomal protein L11 |
TIGRFAM ID | [TIGR01632] 50S ribosomal protein L11 |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00000438423 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAAGA AAGTAGTAGC GGTCATTAAA TTGGCCCTGA ATGCTGGAAA AGCCAACCCA GCACCCCCAG TTGGTCCCGC CTTGGGTCAA CATGGTGTTA ATATCATGAT GTTCTGCAAA GAGTACAACG CCAAAACAGC CGACCAAGCT GGCATGGTGA TTCCTGTAGA AATATCGGTT TATGAAGACC GGAGTTTCAC ATTTGTACTC AAAACCCCAC CAGCATCTGT ATTAATCCGT AAAGCCGCGA AAATTGAAAG AGGTTCCAAC GAACCGAATA AGAAAAAAGT TGGCACAATT ACCACAGCAC AACTGCGAGA AATTGCCCAA ACTAAACTAC CTGACCTCAA CGCTAACGAC ATAGATGCGG CAATGAAGAT TGTGGCAGGA ACCGCCAGAA ATATGGGTGT TACAGTCACC GATTAG
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Protein sequence | MAKKVVAVIK LALNAGKANP APPVGPALGQ HGVNIMMFCK EYNAKTADQA GMVIPVEISV YEDRSFTFVL KTPPASVLIR KAAKIERGSN EPNKKKVGTI TTAQLREIAQ TKLPDLNAND IDAAMKIVAG TARNMGVTVT D
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