Gene Ava_2552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2552 
SymbolrplK 
ID3679457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3153893 
End bp3154318 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content46% 
IMG OID637717898 
Product50S ribosomal protein L11 
Protein accessionYP_323062 
Protein GI75908766 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0080] Ribosomal protein L11 
TIGRFAM ID[TIGR01632] 50S ribosomal protein L11 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000438423 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAGA AAGTAGTAGC GGTCATTAAA TTGGCCCTGA ATGCTGGAAA AGCCAACCCA 
GCACCCCCAG TTGGTCCCGC CTTGGGTCAA CATGGTGTTA ATATCATGAT GTTCTGCAAA
GAGTACAACG CCAAAACAGC CGACCAAGCT GGCATGGTGA TTCCTGTAGA AATATCGGTT
TATGAAGACC GGAGTTTCAC ATTTGTACTC AAAACCCCAC CAGCATCTGT ATTAATCCGT
AAAGCCGCGA AAATTGAAAG AGGTTCCAAC GAACCGAATA AGAAAAAAGT TGGCACAATT
ACCACAGCAC AACTGCGAGA AATTGCCCAA ACTAAACTAC CTGACCTCAA CGCTAACGAC
ATAGATGCGG CAATGAAGAT TGTGGCAGGA ACCGCCAGAA ATATGGGTGT TACAGTCACC
GATTAG
 
Protein sequence
MAKKVVAVIK LALNAGKANP APPVGPALGQ HGVNIMMFCK EYNAKTADQA GMVIPVEISV 
YEDRSFTFVL KTPPASVLIR KAAKIERGSN EPNKKKVGTI TTAQLREIAQ TKLPDLNAND
IDAAMKIVAG TARNMGVTVT D