| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2543 |
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| Symbol | |
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| ID | 3682428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 3143388 |
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| End bp | 3144803 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637717888 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_323053 |
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| Protein GI | 75908757 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.467529 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAGC AAACTTACCC AGCGACAAGC CAGTTAATAA ATACAAAATT ACAATTTAGC
GGTGAAATAT CTGCCCACAG ACAGATATTT CCTGACTGGC AATGTGCAAA ACATAGCTTA
TTTGTTGCTT GTTTGTTGAG TGTGGGTGTA CTAACAGCAA GTTGCGGTTC TTTACCCAAA
GAAACAGCCG AAGCCCAATC TCAGCAACGT AGAGGTGGAG AACGAGGTGG GGTAGCACCT
GTAGATGTGG CGATCGCCCG TAGAGAGAGG CTAGAGACAC AACCAGAGTA TACAGGTACA
ACCACACCAT TTAGAACAAT ATCGTTGCGA TCGCAGGTAG AAGCCAGACT CTTAGCTTTG
AACTTAGATG TAGGTGACAC AGTTAGACGA GGGCAGAACG TCGGACAACT AGATGACATC
ATATTATCCA CAGACCTCAA GCAAGCAGAA GCCGAACTCG CAGCTTTGGA ATCAGAAGTA
GCTAGAGCGA CAACCCAGGT AAGTAATGCC CGCACCCAAG TGGAACGGGC AAGACTCGAA
GTAGTACAGG CTGAAGCAGA TGCCCAACGT CAAGAGAGAT TATTTAAAGA AGGAGCTATA
TCCGAGCAAG CCGCCGAGCA AGCACGGACA CAAGCAAAAA CAGCTACTCA AGCACTCCGC
GCAGCTACTG AGCAAGTCCG AACCGAAGAA CAAGCAGTTG CGGCTGCCAA AGGTAGAGTA
TTTGCCCAAA AAGCCGTAGT TGCCCAAACA AAAGAACGCC GCTCATATAC ACGCCTCACA
TCCCCCCTTA ATGGTGTGAT CACCGAGAGA GTCACAGAGC CAGGTAATCT CTTACAAGCT
GGAGGAGAAG TTTTAAAAAT TGCTGACTTG AGCCAAATTA AAGTAGTAGT GCAAGTCTCC
GAATTAGAAC TAGGACAAAT TCAAGTCGGA CAATCTGTAC AAGTACGCTT AGATGCCTTC
CCAGACCGAG AAATCACTGG TAGAGTCACC CGTATTTCCC CCACCGCCGA TGCTACAGCT
CGTTTAATAC CAGTAGAAGT AGTAATTCCT AATAGTCAAG GCAATATTGG TAGTGGATTG
CTAGCAAGAG TTAACTTTGC CAGTCAAACT CCAGAACGAG TGGTAGTCTC ACAAACAGCC
ATTCAAAGGG AAGGCAGAAA CCAGCAATCC GCCCCAAAAA CCCCAAGACA ATCACAAAAT
CAAAACGGCA CACTGTACGT AGTTACGGAT AGCCAAGGCA AGCCAACTGT CACAGCCCGT
ACAGTCACTT TAGGAAAAAG TGCTGATGGC AAAGTAGAAA TTTTATCTGG CTTACAACCT
GGAGAGCAAT ACGTCGCACG TAGTGGTAGA CCCTTAAAAG ATGGGGAAAA TGTACGTCTT
TCAATTCTTT CAGAGCGAAA CCCTGCGAGG AATTAA
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| Protein sequence | MKQQTYPATS QLINTKLQFS GEISAHRQIF PDWQCAKHSL FVACLLSVGV LTASCGSLPK
ETAEAQSQQR RGGERGGVAP VDVAIARRER LETQPEYTGT TTPFRTISLR SQVEARLLAL
NLDVGDTVRR GQNVGQLDDI ILSTDLKQAE AELAALESEV ARATTQVSNA RTQVERARLE
VVQAEADAQR QERLFKEGAI SEQAAEQART QAKTATQALR AATEQVRTEE QAVAAAKGRV
FAQKAVVAQT KERRSYTRLT SPLNGVITER VTEPGNLLQA GGEVLKIADL SQIKVVVQVS
ELELGQIQVG QSVQVRLDAF PDREITGRVT RISPTADATA RLIPVEVVIP NSQGNIGSGL
LARVNFASQT PERVVVSQTA IQREGRNQQS APKTPRQSQN QNGTLYVVTD SQGKPTVTAR
TVTLGKSADG KVEILSGLQP GEQYVARSGR PLKDGENVRL SILSERNPAR N
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