Gene Ava_2542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2542 
Symbol 
ID3682427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3142307 
End bp3142843 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content41% 
IMG OID637717887 
Producthypothetical protein 
Protein accessionYP_323052 
Protein GI75908756 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.831139 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAATCGC TGTCAAAACT TGCACACACC GTTGATGAAT CCCAAATCAT CGAGTTTTTT 
CAAGAGTCGG TTGGTCAGTG GCGTTCGCAA AGGCGTTATT ATACTCTCCC TGACGGTGAA
ACCAAGGAGA TGGTGAGTAT GATTACTATC CGATTTTTGG AACAAGGTTG CGATGAATTA
CAAGAACTGG CTCAGATACA TGAATTAGCT GAGTCAGTTT TTTTGATCTG TGGTGCAGAG
GTGACATGGT GCAGTACAGA TGTTCTAAAA AACAGGAGTG AGTCTCAAGG TTCCACACTA
TTTGGTGCTT TAGGAAACAC CTTGTACCGC GATCGCGGTT TTGCCACATC TAAACCAGTC
ACAGCCCAGT ATAATTTTCC TAACCCCAAA ACCTTATATT TGCGAACCGA ATACAATGGT
TCAGTATTTG AGGAAGAATT AAAGTTAATT GGTAGCAAAT ATCGCACCAG ACAAACTATT
ATTTCTCGTG CTGGTGAGCA ATTAATGATA GGTCAGTATA TAGAAAAGAG AATATAG
 
Protein sequence
MKSLSKLAHT VDESQIIEFF QESVGQWRSQ RRYYTLPDGE TKEMVSMITI RFLEQGCDEL 
QELAQIHELA ESVFLICGAE VTWCSTDVLK NRSESQGSTL FGALGNTLYR DRGFATSKPV
TAQYNFPNPK TLYLRTEYNG SVFEEELKLI GSKYRTRQTI ISRAGEQLMI GQYIEKRI