Gene Ava_2539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2539 
Symbol 
ID3682424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3139210 
End bp3139464 
Gene Length255 bp 
Protein Length84 aa 
Translation table11 
GC content46% 
IMG OID637717884 
Producthypothetical protein 
Protein accessionYP_323049 
Protein GI75908753 
COG category 
COG ID 
TIGRFAM ID[TIGR03049] photosystem I reaction center subunit PsaK 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTTCAT CAACCTTATT AGCAGTAGCT GCAACTGTAC CTGCAACCCC TGAATGGTCG 
CCAACCGTAG GCATTATCAT TAGTGCTAGC AGTGTGGTAG CTCTTTTGTT CGCTCTCAAA
GTTGAATATC CCCAAGTAGG CCCCAAATTC CCTGGGTTGC CTATTAGCGT TCCCACCTTT
ATCGGTGCAA TGGCTTTTGG TCATGTTCTT GGCATTGGTA TCGTCTTGGG GTTGACTAAT
ATTGGTCGTC TGTAG
 
Protein sequence
MISSTLLAVA ATVPATPEWS PTVGIIISAS SVVALLFALK VEYPQVGPKF PGLPISVPTF 
IGAMAFGHVL GIGIVLGLTN IGRL