Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2532 |
Symbol | |
ID | 3682417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 3132393 |
End bp | 3133220 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637717877 |
Product | binding-protein dependent transport system inner membrane protein |
Protein accession | YP_323042 |
Protein GI | 75908746 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAAC TAAACTGGAA TTGGAAATCT GCTGATTTTT GGAGTCTAGC AGCGCTACTG CTGGGGGCAT TGATTGTGCT GTTGCCACTG TTTGTGGTTT TTCTCACTTC TTTTGCACCT CCAGGTTCAA ATTTAGAACT TTTGCCCAAA AATAATTGGT CATTAGCTAA TTACCACGAT GCTTGGCAAC GAGGTAAGTT CTTGTTGGCA TTCGCTAATT CTACCTTGGT AGCGATCGCA GTGACGGCAT TTCAGATTGT CACTTCAGCG CTAGCTGGCT ACGCCCTAGC GAGACTGAAA TTCCGGGGTA GGCAAATACT ACTTTTGATT GTTTTAGCGA CTTTAATTAT CCCTTTTCAA TTACTAGTGA TTCCCATCTT CTTGGTGTTG AAGTGGGGAC ACTTGATTAA TACCTACGGA GCGCTAATTT TACCAACTGC TGTTAATGGC TTTGGCATTT TCCTTTTACG TCAATATTTC CAGACAATTC CCGTAGAGTT GGAAGAAGCC GCAACCATCG ATGGAGCGAA CCGGATACAA ATTTTGTGGC AAGTGATGTT ACCTCTGGCT CGCCCCGCTT TGGTGACGCT GTTTCTGTTC ACCTTTATTG CTGAATGGAA TGATTTATTT AAACCTTTGG TTTTCACCAC CAGACCAGAA TTAAGAACGG TGCAGCTAGC ATTGGCGGAG TTTCAGGAGC AGTTTACCAA TAATTGGCCT TTGATGATGG CAGCAGTCAC AATTGCAACT GTACCTGTAA TGGTGCTATT TCTTATCGGT CAGCGTCAGT TTATCCAAGG TATTGCTGCT ACTGGTATGA AAAATTGA
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Protein sequence | MTKLNWNWKS ADFWSLAALL LGALIVLLPL FVVFLTSFAP PGSNLELLPK NNWSLANYHD AWQRGKFLLA FANSTLVAIA VTAFQIVTSA LAGYALARLK FRGRQILLLI VLATLIIPFQ LLVIPIFLVL KWGHLINTYG ALILPTAVNG FGIFLLRQYF QTIPVELEEA ATIDGANRIQ ILWQVMLPLA RPALVTLFLF TFIAEWNDLF KPLVFTTRPE LRTVQLALAE FQEQFTNNWP LMMAAVTIAT VPVMVLFLIG QRQFIQGIAA TGMKN
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