Gene Ava_2522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2522 
Symbol 
ID3682620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3118508 
End bp3119770 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content40% 
IMG OID637717866 
Producthypothetical protein 
Protein accessionYP_323032 
Protein GI75908736 
COG category[S] Function unknown 
COG ID[COG1649] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.233662 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCGGT TGGCAAAATT GTTTTTTTCG TACTTACTGT TTATACAATT AATATTGTAT 
TTAACAGGAT TATCTATCCC TTCATTTTCT AATTATGAAC AAAAAAGCAA TCTACCGACT
ACAACAGAAA TTCGTGGAGT TTGGCTGACT AATGTTGCTA GCGGTGTACT TTTTGTACCC
TGGGGTATTA ATCGTGCTAT TGACCAACTA TCTGCACTAA ACTTTAATAC AATTTATCCT
GTAGTTTGGA ACAGGGGCTA TACCTTTTAT AAAAGTGGTA CAGCTAAATC TGTTACGGGT
GCTGATACTC AACCGCTGCT GAATTTTGTC CACGGGGGAC AGGATGTTTT AGCAAAGATA
GTTGCACTTG CTAAACCGAA AAATTTAAGC GTTATTCCCT GGTTTGAATA TGGTTTTATG
GCACCGCCCG ATTCAGTGAT AGCAAAACGA CATCCTGAGT GGTTAACAAA CGGTCAAGGT
GGAGTCGTAT CTATTAGTGA AATGTTACCA GAAGAAAGCG ACACCGACCC TACAAATAAG
TTAGTTTGGC TCAATCCTTT ACACCCAGAG GTACAGCAGT TTATCCTATC GCTAATTACA
GAAGTTGTTA CTAATTATCA TATTGATGGC ATTCAAATTG ATGATCATTT TGGAATGCCA
GTACAGTTTG GCTATGATCC ATATACAACT GAACTTTATC AAAAAGAACA TCAAGGTAAA
AGCCCCCCTC GCAATCATTT TGATGGGGAG TGGATGAAGT GGCGTGCTAA CAAGATCACT
CGTTTCATGA CACAAGTTTC TCAAGTAGTG AAAGAGATTA AACCCAATGT TAAGGTATCT
CTTTCTCCTA ATTCGCAAGC TTTTGCTTAC AGGTATTATT TGCAAGATTG GGCAAGTTGG
ATAAAAACAG GTTTAGTGGA TGAATTGATT TTGCAGGTGT ATCGCAATGA TAAAAGTAGC
TTTGTGTACG AATTAGAACA GCCTGCTGTC AAGCTTGCGC GTACTCAAAT TCCCGTAGCG
ATTGGCATAT CCACAGGAAC TTTGCGAAGT CCTGTTAAGA TTGAGCAAAT TAGAGAACAA
GTACAAGCTG TACGCGATCG CTCTTTTTTT GGTATCTCTT TCTTTTACTG GGAAAGTCTG
TGGGGTTACA TCACCCCAGA ATCACCCCCA TACCGCCGTC AAATATTTCA ACAAATGTTT
ACTGCTAAAG CCGCTAGGCC ATTAGCACCA GTGAGGGAAA GCAAAAGGCA GGGTGAAGGG
TAA
 
Protein sequence
MTRLAKLFFS YLLFIQLILY LTGLSIPSFS NYEQKSNLPT TTEIRGVWLT NVASGVLFVP 
WGINRAIDQL SALNFNTIYP VVWNRGYTFY KSGTAKSVTG ADTQPLLNFV HGGQDVLAKI
VALAKPKNLS VIPWFEYGFM APPDSVIAKR HPEWLTNGQG GVVSISEMLP EESDTDPTNK
LVWLNPLHPE VQQFILSLIT EVVTNYHIDG IQIDDHFGMP VQFGYDPYTT ELYQKEHQGK
SPPRNHFDGE WMKWRANKIT RFMTQVSQVV KEIKPNVKVS LSPNSQAFAY RYYLQDWASW
IKTGLVDELI LQVYRNDKSS FVYELEQPAV KLARTQIPVA IGISTGTLRS PVKIEQIREQ
VQAVRDRSFF GISFFYWESL WGYITPESPP YRRQIFQQMF TAKAARPLAP VRESKRQGEG