| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2520 |
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| Symbol | |
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| ID | 3682618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 3115941 |
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| End bp | 3117419 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637717864 |
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| Product | glycolate oxidase subunit GlcD |
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| Protein accession | YP_323030 |
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| Protein GI | 75908734 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.855271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.213309 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTACCC AAGACCAAGA TCAGAAACAA CGTAACTGGA AACCCATTAT CAAAGCATTC
GAGGCTGTCC TGGGTACAAA TGGCGTAGTC CAACGCCGTG AGGAACTTAT CACTTATGAG
TGTGATGGTT TAACTAGCTA TCGCCAACGT CCGGCTGTGG CGGTGTTACC TAGAACGACA
GAACAAGTGG CGGCGGTAGT TAAAATCTGT AACCAGTATG CTGTACCCTT CATTGCGCGG
GGTTCTGGTA CTGGTTTATC TGGTGGTGCT TTACCATCGG AAGATTCAGT TTTAATTGTT
ACTTCTTTAA TGCGGCAAAT TCTGAATGTT GATTTAGATA ATCAGCGCAT AGTTGTACAA
CCAGGAGTAA TTAACAGTTG GGTGACACAA ACTGTTAGTG GTGCGGGATT TTATTATGCG
CCAGACCCTT CTAGTCAAAT TATCTGTTCA ATTGGGGGTA ACGTTGCGGA AAACTCTGGC
GGGGTACATT GTCTAAAATA TGGTGTCACA ACAAACCACG TTTTGGGTTT GAAAATCGTC
ACACCTGAAG GGGAAATAGT TGATTTAGGT GGACAAATTC CTGAAGCCCC TGGTTATGAC
TTAACTGGTA TATTTGTCGG TTCGGAAGGT ACTTTAGGGA TTGCTACAGA AATTACTTTG
CGGATTCTCA AAAGTGCAGA ATCAATCTGT GTATTATTAG CAGACTTTAC CAGTGTGGAA
GCGGCTGGGG CGACTGTTTC TGATATCATC AGCGCGGGGA TAATTCCTGG TGGGATGGAA
ATGATGGATA ACGTTAGTAT TAATGCAGTG GAAGATGTTG TCGCCACTAA TTGTTATCCG
CGTGATGCCA CAGCGATTTT GTTAGTAGAA ATTGATGGTT TAGATGTCGA AGTTGCCGTG
AATAAACAAC GGGTGACTGA CATTTGTCAA CAAAATGGGG CGCGTAGTGT GACTTCTGCT
AGTGACCCAG AAACTAGATT GAAATTATGG AAAGGGCGTA AGGCGGCTTT TGCTGCGGCT
GGTCATTTAA GCCCAGATTA TTATGTGCAG GATGGTGTCA TTCCTCGGAC TCAGTTACCT
TATGTATTGC AGGAAATTGA GGCATTGAGT CAAAAATTTG GGTATCCAAT TGCCAATGTT
TTTCATGCTG GTGATGGTAA TCTGCATCCA TTGATTCTAT TTGATAATTC CATTTCTGGT
GCATTAGAGA AAGTCGAAGA ATTGGGAGGA GAAATTCTCA AACTTTGTGT GAGAGTCGGG
GGTAGTATTT CTGGAGAACA TGGTATTGGG GCAGATAAAA AATGTTATAT GCCTGATATG
TTTAGTGATG TTGATTTAGA AACAATGCAG TGGATCAGAC AAGTATTTAA TCCCCAAGGT
TTGGCTAATC CTGGAAAGAT ATTCCCCACA CCGCGCACTT GTGGCGAAGC TGCAAATGCT
ATTAAAAATC AACATTTTGA AGGAGTAGAA AGATTTTAA
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| Protein sequence | MLTQDQDQKQ RNWKPIIKAF EAVLGTNGVV QRREELITYE CDGLTSYRQR PAVAVLPRTT
EQVAAVVKIC NQYAVPFIAR GSGTGLSGGA LPSEDSVLIV TSLMRQILNV DLDNQRIVVQ
PGVINSWVTQ TVSGAGFYYA PDPSSQIICS IGGNVAENSG GVHCLKYGVT TNHVLGLKIV
TPEGEIVDLG GQIPEAPGYD LTGIFVGSEG TLGIATEITL RILKSAESIC VLLADFTSVE
AAGATVSDII SAGIIPGGME MMDNVSINAV EDVVATNCYP RDATAILLVE IDGLDVEVAV
NKQRVTDICQ QNGARSVTSA SDPETRLKLW KGRKAAFAAA GHLSPDYYVQ DGVIPRTQLP
YVLQEIEALS QKFGYPIANV FHAGDGNLHP LILFDNSISG ALEKVEELGG EILKLCVRVG
GSISGEHGIG ADKKCYMPDM FSDVDLETMQ WIRQVFNPQG LANPGKIFPT PRTCGEAANA
IKNQHFEGVE RF
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