Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2518 |
Symbol | miaA |
ID | 3682616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 3113389 |
End bp | 3114273 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637717862 |
Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
Protein accession | YP_323028 |
Protein GI | 75908732 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00635543 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.128845 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAAAT TAATCGTAAT TTGTGGAGCT ACGGCGACGG GTAAATCTGG TTTGGCTTTG AACTTAGCCA TGCGGTTGGG TTCTGTGATT TTGAGTGCTG ATTCTCGTCA AGTGTATCGT GAATTTGATA TTGGTACAGC GAAGCCAACG CTGGCAGAAC AAAAAGCCGT TCCTCATTAT CTAATAGATA TCTGCACTCC CAGAGAAACG ATGACAGTTG CAGATTATCA AGAACAGGCA CAAGCACTAA TTAATTCTCT GCCAGTTTCG CCGTTATTGT TAGTGGGAGG TACTGGTTTA TATATACGTT CTATTGTGCA GGGGATGAAG ATCCCCAGGG TTGCGCCGAA TTATGAATTG CGATCGCAAC TCGAATCTTT AGGTCAAACT ACACTCTACG GCATATTACA ACAAGTTGAT CCCGTTGCGG CTCAAAAGAT TCATCCCCAT GATCCTGTAC GGACTTTACG GGCAGTAGAA GTATTTTACG TTACTGGCAT TCCCATATCG GCACAGCAAG GAGAAAATCC CCCAGATTAC CCTATTTTAC AAATTGGATT AGATTGTGAA ATGGAAAGAT TGAGTGAGCG CATTCACAAA CGCACTGAAC AAATGATAGC AGATGGCTTA GTTGGAGAAG TTGAATATCT GTGCCAAAAA TATGGTGCTG ATTTACCCTT GTTAAATACT TTAGGATATC AAGAAATTAA GCAATATTTA GCTGGAGAAA TTTCCTTAGA AGCAGCCAAA GAATTAATCG TACTGCATAC AAGACAATTT GCCAAACGCC AACGCACCTG GTTTAGAGCC TATCCCCAAA TTGAGTGGTT TAATGCAGAT GATGCTGATT TATTAGATAT TGTTTGGCAG CGCATACAAC AGTAG
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Protein sequence | MTKLIVICGA TATGKSGLAL NLAMRLGSVI LSADSRQVYR EFDIGTAKPT LAEQKAVPHY LIDICTPRET MTVADYQEQA QALINSLPVS PLLLVGGTGL YIRSIVQGMK IPRVAPNYEL RSQLESLGQT TLYGILQQVD PVAAQKIHPH DPVRTLRAVE VFYVTGIPIS AQQGENPPDY PILQIGLDCE MERLSERIHK RTEQMIADGL VGEVEYLCQK YGADLPLLNT LGYQEIKQYL AGEISLEAAK ELIVLHTRQF AKRQRTWFRA YPQIEWFNAD DADLLDIVWQ RIQQ
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