Gene Ava_2515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2515 
Symbol 
ID3682612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3109009 
End bp3109557 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content42% 
IMG OID637717858 
Producthypothetical protein 
Protein accessionYP_323025 
Protein GI75908729 
COG category[R] General function prediction only 
COG ID[COG3688] Predicted RNA-binding protein containing a PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000246969 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.112368 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGTT CCCCAATCCC AGCCGTTTTA TTAGTAGACG GCTACAATAT AATTGGCGCT 
TGGCCTTGTT TGAAAAAAAC CCGTGATAAA AATGGACTAG AGGCTGCTCG CGGGCAACTT
GTGGAAGCAA TGACAAGTTA CAGCTCGTAT CAGGGTTATG ACACTCAAAT AGTTTTTGAT
GCTCACTATC AAAATACTTG TAGTAACAAA GAAATTATTA CAGAGCTAGT TTCAGTTTAT
TACACAGATT TTGGGCAAAC AGCAGATACT TATATTGAAA AAATTTGTGC TTCTTTGCGC
CCTGAAGTTT CGCAAGCTCG CATTTCTCGT GTAATTGTTG CTACATCAGA CCGCGCACAA
CAGTTGACAG TACAGGGATA CGGGGCTGAA TGGTTATCAG CATATCAACT GTGCGGCGAA
GTAGAAACTA CAGTGTGTAG GATGCGGCAA AAGTATCAAT CTCGTAAACA ATCTAAAAGC
AGGTTTCTCG CCAGCACCAT TGATCCTCAA GCGCGTCAAA AGCTAGCTGA ACTACGAATG
GGGATTTAA
 
Protein sequence
MPRSPIPAVL LVDGYNIIGA WPCLKKTRDK NGLEAARGQL VEAMTSYSSY QGYDTQIVFD 
AHYQNTCSNK EIITELVSVY YTDFGQTADT YIEKICASLR PEVSQARISR VIVATSDRAQ
QLTVQGYGAE WLSAYQLCGE VETTVCRMRQ KYQSRKQSKS RFLASTIDPQ ARQKLAELRM
GI