Gene Ava_2514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2514 
Symbol 
ID3682611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3108045 
End bp3108722 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content47% 
IMG OID637717857 
ProductABC transporter-like 
Protein accessionYP_323024 
Protein GI75908728 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000616044 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.108672 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGACA TGGGCATTGT CGTTAAAGAT TTAAATTTCA GTTGGCCGAA CGGTGAGACA 
GCAATTCAAT CTTGCTCTTT GGAAGTACCC CAAGGAGAAT TTTGGATGCT TTTGGGTACT
AATGGCAGTG GCAAATCTAC CTTACTCCGT CTCCTAGCAG GGCTTTTGGC TCCTAAATCT
GGTGAAATTG GGGTTTTACA TCCTGTGGGT TTTGTCTTCC AAAACCCTGA TCATCAATTG
GTGATGCCAA CTGTTGGTGC TGATGTGGCT TTTGGTTTGG TGGAAGAAAA ACTGCCAACA
TCGGCTGTCA GAGCGAGAGT AGAAGAGGCA CTGGGGGCAG TGAATTTGAG TGCTTTACAG
CTACGCCCAA TTTACGCCCT GAGTGGGGGA CAAAAGCAGC GTGTGGCTAT TGCTGGAGCG
ATCGCTCGTC GCTGTGAAGT CTTATTATTA GATGAACCTA CAGCCTTACT TGACCCAGAT
AGTCAACTGG ACTTAGTGGC CAGTGTCCGC CGCCTAGTGA AAAGTAGGGG TATCACAGCT
TTGTGGGTAA CACACCGCTT GGATGAATTG AATTACTGTG ATGGTGCTTT CTTACTGGAG
AAAGGTTGTT TAGTAGATCA AGGTGAACCC CAACGCCTCA AACAACGCCT TATGGAAGTA
CACCAAGAAG CTTCTTGA
 
Protein sequence
MADMGIVVKD LNFSWPNGET AIQSCSLEVP QGEFWMLLGT NGSGKSTLLR LLAGLLAPKS 
GEIGVLHPVG FVFQNPDHQL VMPTVGADVA FGLVEEKLPT SAVRARVEEA LGAVNLSALQ
LRPIYALSGG QKQRVAIAGA IARRCEVLLL DEPTALLDPD SQLDLVASVR RLVKSRGITA
LWVTHRLDEL NYCDGAFLLE KGCLVDQGEP QRLKQRLMEV HQEAS