| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2510 |
|---|
| Symbol | |
|---|
| ID | 3682607 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 3103321 |
|---|
| End bp | 3105045 |
|---|
| Gene Length | 1725 bp |
|---|
| Protein Length | 574 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637717853 |
|---|
| Product | S-layer region-like |
|---|
| Protein accession | YP_323020 |
|---|
| Protein GI | 75908724 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000000393409 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0737899 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAATC TATTGTGGAA ATCCCTAGTG GTTAGCCCTG CTGTTTTAGG CGCAACACTA
TTAGTGTCGT CAGCAGCGAT CGCAGCTACA AATGCAACTA CAGAATTATC AGTAACCGAA
ACAGTAGTAC CTACTGAACT AGCTCAACAA CCAGAAATTG TGGCTCAAGC AGCCCCAACA
ACTGAAGATA CAAAGGTTAT CGACCAAGTT AACCGCTACA GCAGCGAAGG TAAAGGTAAC
GCTCAAAGCC AAGTCACCTC GGTTTCTCAG TTCTCTGACG TACAGCCAAC CGATTGGGCA
TTCCAAGCAT TACAGTCTTT GGTTGAGCGC TACGGTTGTA TTGCTGGTTA TCCCAACGGT
ACCTATCGTG GAAACCGTGC TTTAACCCGC TATGAATTTG CGGCTGGTTT AAACGCTTGT
TTGGATCGTG TCAATGAACT GATTGCTACA GCAACAGCAG ACCTAGTAAC CAAGCAAGAT
TTAGCTACCT TACAACGCTT ACAAGAAGAA TTTTCTGCGG AATTGGCAAC CCTGCGCGGT
CGTGTAGATG CTCTAGAAGC ACGGACTGCG GAATTGGAAG CTAACCAGTT CTCTACAACT
ACAAAACTAG TCGGTGAAGC TATCTTCGCC GTTACCGATG CTTTCGGTGA AAACACTGGC
GACGCTAACA ACACTGTTTT CCAAAACAGA GTTCGTCTAG GCTTGCAAAC CAGCTTCACA
GGTAGAGACG TTTTAACCAC CCGTTTAGCG GCTGGTAATG CAACTGGCTT TGATTTTAGA
GATAACAATA ACAATTTTAT TGATGCTGGT GGTCAAGGAC TACAAACTTT CCAAGTTGGT
AGTACTGGCA ACAATAGTGT AGAAATAGAC CGATTGACCT ATGAAGCACC CGTTGGCCCA
GCTCAAGTTT ACCTTGCCGC TAGTGGTGGA CGACACAGCC ATTATGCAGC CGTAAACAAC
CCTTATTTCT TTGACAAGAC TGATGGCGGT AACGGCGCTT TATCTACATT TTCCTCGGAA
AATCCCATCT ACCGCATTGG TGGTGGTGCA GGTATCGCCT TCAACGTGCC TTTTGGTCAA
GGTGGTAGCA TCTTAAGACC TAGCTCCTTT ACCGTAGGTT ATTTGGCTTC GGATGCTAAT
AACCCTGGCC CTAATACTGG TCTATTCAAC GGCGATTACG CTGCTTTAGG TCAGTTGAAC
TTTAGTGTAG GCGATCGCTT GGCGTTAGCT GCTACTTATG TTCATGGTTA TAGTGGTGCC
GGTGGCGTAC TGTTCAACTC TGGAGATACT GGTGCTATCG TAGGTACTTC ACTAGCCAAC
AATAATAGTT TCCTGAATGC TTCTTCCAGC AACTCCTACG GTTTGTCTGC GGCATTCAGA
CCTAGCGATA AACTATCAGT TAGCGGCTTT GTATCTTACA GCGATGTCAC AGGCTTCGGT
GCCAACGATG ACAGAGAAGT TTGGAGCTAC GGTATCGGTG TAGCATTACC TGACTTTGGT
AAGAGAGGTA ACGTCCTGGG TATCTTCGCA GGCGCTCAAC CTTACGCACG CGGTGTCCAA
GCTGGTGCTA ACGAAGTTCC TTACCAAGTT GAAGGTTTCT ACAAATATCG CGTATCTGAC
AACATCTCCA TCACCCCTGG TGTAATCTGG TTGACTAACC CTGGTCAGAA CAGCAATGCA
GATGATGCGA TCATCGGTAC TCTGAGAACA ACCTTCACTT TCTAA
|
|---|
| Protein sequence | MSNLLWKSLV VSPAVLGATL LVSSAAIAAT NATTELSVTE TVVPTELAQQ PEIVAQAAPT
TEDTKVIDQV NRYSSEGKGN AQSQVTSVSQ FSDVQPTDWA FQALQSLVER YGCIAGYPNG
TYRGNRALTR YEFAAGLNAC LDRVNELIAT ATADLVTKQD LATLQRLQEE FSAELATLRG
RVDALEARTA ELEANQFSTT TKLVGEAIFA VTDAFGENTG DANNTVFQNR VRLGLQTSFT
GRDVLTTRLA AGNATGFDFR DNNNNFIDAG GQGLQTFQVG STGNNSVEID RLTYEAPVGP
AQVYLAASGG RHSHYAAVNN PYFFDKTDGG NGALSTFSSE NPIYRIGGGA GIAFNVPFGQ
GGSILRPSSF TVGYLASDAN NPGPNTGLFN GDYAALGQLN FSVGDRLALA ATYVHGYSGA
GGVLFNSGDT GAIVGTSLAN NNSFLNASSS NSYGLSAAFR PSDKLSVSGF VSYSDVTGFG
ANDDREVWSY GIGVALPDFG KRGNVLGIFA GAQPYARGVQ AGANEVPYQV EGFYKYRVSD
NISITPGVIW LTNPGQNSNA DDAIIGTLRT TFTF
|
|---|
| |