| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2507 |
|---|
| Symbol | |
|---|
| ID | 3682760 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 3100898 |
|---|
| End bp | 3101605 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637717850 |
|---|
| Product | heat shock protein DnaJ-like |
|---|
| Protein accession | YP_323017 |
|---|
| Protein GI | 75908721 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.00174132 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.410211 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGATT CTAAGAAAGA TTTAAATCAC TACGAAATTC TCAAGGTCAG CCCTAAAGCC
AGCCAAGCGG AGATCAAGCA AGCTTATCGC CGCTTGGTAA AATTATTTCA CCCGGATAGT
AACCAGGACA CAGCAGATAA AGAGCAGATT ATCCGAATTA ACGCAGCTTA TGAAATTTTA
GGCGACAATC AAAGTCGCCT CAATTATGAT GAGGAACTGC GGGATAAATC TCAGAAATTC
AAAGGCGATC GCCTACAGCG TACTACATCA GCACAAAAAG AATATCAAGT AAAACGTAAA
AGCGGCAAAG ATGCTGATGA ACAGGTAGAA GAATGGCTAC GCTTGGTATA TCAACCAGTC
AATCGTTTAC TTTCTACTAT TCTCAGTTCG TTGGAAGAAC AGATTGAGGA ACTAGCGGCT
GATCCCTTTG ATGATGAACT ATTGGACGAG TTTCAAGAAT ACCTACAAAC TTGTAAAGAT
GACTTCAAGC AAGCCCAAAC TATTTTTCGC TCCCGTCCCA ACCCTCCTAG TATGGCGAGA
GCCGCCGCGC ACCTTTACTA CAGCCTCAAT CAAGTAGCAG ACGGACTAGA AGAATTGGCT
TACTTTCCCT TAAACTACGA TGATCGCTAT TTACATACAG GTCAAGAATT ATTCCGCATT
GCTACAAGAT TGCACTATGA AGCACAAGCA TCTGTAAGCA GTCATTAG
|
|---|
| Protein sequence | MVDSKKDLNH YEILKVSPKA SQAEIKQAYR RLVKLFHPDS NQDTADKEQI IRINAAYEIL
GDNQSRLNYD EELRDKSQKF KGDRLQRTTS AQKEYQVKRK SGKDADEQVE EWLRLVYQPV
NRLLSTILSS LEEQIEELAA DPFDDELLDE FQEYLQTCKD DFKQAQTIFR SRPNPPSMAR
AAAHLYYSLN QVADGLEELA YFPLNYDDRY LHTGQELFRI ATRLHYEAQA SVSSH
|
|---|
| |