Gene Ava_2502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2502 
Symbol 
ID3682755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3096328 
End bp3097569 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content45% 
IMG OID637717845 
Productfumarate reductase/succinate dehydrogenase flavoprotein-like 
Protein accessionYP_323012 
Protein GI75908716 
COG category[R] General function prediction only 
COG ID[COG2081] Predicted flavoproteins 
TIGRFAM ID[TIGR00275] flavoprotein, HI0933 family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.472711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.7121 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTACCTT CAAAAATTGT AGTTGTTGGC GGCGGTGCCG CAGGATTCTT TGGTGCGATC 
GCTTGTGCTA GAGTCAACCC CCAAGCAGAA GTTACGTTAA TTGAAGCCAG TCGTCAAACA
CTGGCGAAAG TCAGTGTTTC TGGCGGTGGG CGTTGTAATG TGACTCACGC TTGTTTTGAT
GCACATGAGT TAGTGCAGTA TTACCCTAGA GGCGGTAAAG CTTTGCGGGG AGCTTTCGCA
CGCTTTCAGG CTAAAGATAC GGTAGATTGG TTTGCAACCC AAGGTGTGCG GTTAAAAACT
GAAGCAGATG GGCGGATGTT CCCCATCACA GATAGTTCGG AAACGATTGT AGATTGTTTG
ATGAACGCAG CCACAGCCGC AGGGGTGGAA ATATTAACAG GAGTGGCTGT TGCATCAATT
AAACAGTCAC AAGGGAATCA GTTTGAGATT TTTTGCAGGT CGGGGAAGAT CATCAACTGC
GATCGCCTAT TATTAGCTAC GGGTAGCAGT CGTGTCGGCT ATCAAATAGC CCAAGAATTG
GGACATCATA TTGAATCACC AGTCCCATCA CTATTTACCT TTAATATTTC TGAAGCTAAA
TTGCGGGCGT TAGCAGGTAT TAGCGTTAAC CCGGCGCGGT TGCGGTTATG TGCTGATGGT
GCATCACCAC TGGAACAAAC CGGCCCTTTG TTAATAACTC ATTGGGGCTT AAGTGGCCCG
GCTGTCCTCA AGCTTTCCGC TTGGGGTGCA AGATTGCTAC ACGACAAACG TTATCAAGCA
ACCTTGTTAG TTAATTGGTT GCCAGATTTT TCTCAAGAAC AAGTACGGCA AAATATCCTA
GCAATAAAAA ATGAATGGGG AAAGCGGGCG ATCGCTTTAC ATCGTGGCGT TGATTTACCG
CACCGTCTTT GGCAATATAT CATTGCTCGT GTCGGCATTA CCACAGATGA GCGTTGGGCA
GGATTATCCA ATAAAACCCT CAATCTGCTA GTTCAAGAAC TCACTCAAGG GCAATATTTA
ATTAGTGGTA AAGGAGTCTT TAAAGAAGAA TTTGTCACCT GTGGTGGTGT GAATCTGAAG
GAAATTAATT TTAAAACAAT GGAAAGTAAA CTTGTGCCAA ATCTCTACTT TGCTGGAGAG
ATTTTGGATA TTGATGGTGT TACTGGTGGA TTTAATTTTC AAAGTGCTTG GACAACAGGT
TACTTGGCAG GAACAGCTAT GGGGGAACAT AGTGCTGATT AG
 
Protein sequence
MLPSKIVVVG GGAAGFFGAI ACARVNPQAE VTLIEASRQT LAKVSVSGGG RCNVTHACFD 
AHELVQYYPR GGKALRGAFA RFQAKDTVDW FATQGVRLKT EADGRMFPIT DSSETIVDCL
MNAATAAGVE ILTGVAVASI KQSQGNQFEI FCRSGKIINC DRLLLATGSS RVGYQIAQEL
GHHIESPVPS LFTFNISEAK LRALAGISVN PARLRLCADG ASPLEQTGPL LITHWGLSGP
AVLKLSAWGA RLLHDKRYQA TLLVNWLPDF SQEQVRQNIL AIKNEWGKRA IALHRGVDLP
HRLWQYIIAR VGITTDERWA GLSNKTLNLL VQELTQGQYL ISGKGVFKEE FVTCGGVNLK
EINFKTMESK LVPNLYFAGE ILDIDGVTGG FNFQSAWTTG YLAGTAMGEH SAD