| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2500 |
|---|
| Symbol | |
|---|
| ID | 3682753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 3094630 |
|---|
| End bp | 3095709 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637717843 |
|---|
| Product | Rieske (2Fe-2S) region |
|---|
| Protein accession | YP_323010 |
|---|
| Protein GI | 75908714 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.455012 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGCAA ACTCTCCGCA TATCAAGGCT ACTCATAAAC CGAAAATTTT TAATAATTCA
GAACGTTTTA TTGAGGGATG GTATTGGGTA ATACCATCTG ATAATTTAGG AATAAATGAA
GTAAAATCTA TCACTCTCTT AGGTAGGAAA CTAGTAATTT ATCGCGGACA AGATTACCAA
GTAACTATTT GTGATGCCTA TTGTCCACAT ATGGGCGCTC ACTTGGGAGA AGGTACTGTT
GAAGGTAATG AATTACGCTG TGCTTTCCAT CACTGGAAAT TTAATGCTGA TGGAATATGT
GTGGAGATTC CGTGTTTAGA TGAACCTCTG TCCCTCAAGT TAAAAACTTG GCCGACGGTG
GAGAAGTACG GAATAATATG GATTTGGACT GGAGAAATAC CACGAGAATC TGTACCATTC
GTTCCAGAGT TAGAGTTTCA GGATTACGAG GCTGTTCTCG GTTCTAGTTT TGTGATAAAT
TGCCATCCTC ATCTAATTAT GTTGAATGCT ATTGATACTC AATATTTTCA AGGAGTCCAG
GTTTTAGATA TTGGCTTTGA AAAACAGGAA TTAAATCAAA ATGCCATTAT TTTTAGTAAA
TATAAACGAC AATATCATGA TTTGCCGTTT AAAAAAGTCT TTCGTCCTTT ATACAAAAAT
CCTATTTATA GTATTTGCTA TTGGTATGGT AGTACAGTCA CTTTAACCGT AGGAACAGAC
TTACGCCGTT GCTATCTGAT GTTAGCTTTG CGGTTAATTG CAGGGGAACA GGTAGAAGTA
CAAACTATAT TTTTTACTAA GCAACGTAAA GGTCTTTTGG GTTGGTTATT TAACCGTTTG
ATGTTATGGC TGAGTAATTC TTTGGTGCAG GAATTAATCA GGGATGAGAG AAACATTTTA
CAGAATATGC AGTTTAATTT AAAAAATCCC ATCAAAGTAG ATCAATCGAT TGTGCAATTA
ATCAATCATG TGGAAATGCA AAAACCTTTG ATGTGGAAGA CTTGGCTGTT AGCGCGATCG
CCTGAGACAG AGGTAAAGGA AACTCAGACT AAATGGCGAG ATGAATTGAC TAACGATTAA
|
|---|
| Protein sequence | MDANSPHIKA THKPKIFNNS ERFIEGWYWV IPSDNLGINE VKSITLLGRK LVIYRGQDYQ
VTICDAYCPH MGAHLGEGTV EGNELRCAFH HWKFNADGIC VEIPCLDEPL SLKLKTWPTV
EKYGIIWIWT GEIPRESVPF VPELEFQDYE AVLGSSFVIN CHPHLIMLNA IDTQYFQGVQ
VLDIGFEKQE LNQNAIIFSK YKRQYHDLPF KKVFRPLYKN PIYSICYWYG STVTLTVGTD
LRRCYLMLAL RLIAGEQVEV QTIFFTKQRK GLLGWLFNRL MLWLSNSLVQ ELIRDERNIL
QNMQFNLKNP IKVDQSIVQL INHVEMQKPL MWKTWLLARS PETEVKETQT KWRDELTND
|
|---|
| |