Gene Ava_2481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2481 
Symbol 
ID3682832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3078137 
End bp3079102 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content46% 
IMG OID637717824 
Producttaurine catabolism dioxygenase TauD/TfdA 
Protein accessionYP_322991 
Protein GI75908695 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2175] Probable taurine catabolism dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.914781 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.197499 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTACA AGCACATTGA AGTTAAGCCT GTATCTGGCT TTATCGGTGC AGAAATTGGT 
GGTGTAGACC TTTCTACTCA TCTGCAAGAT GAAACGATCC AAGAAATTCG CAAAGCTTTA
CTGAAGTGGA AAGTTGTATT TTTTCGCAAT CAGAACATTG ATCATGCGGC TCAGATCGCG
TTCACAGGGC GTTTTGGTGA AGTAACCTAT GCTCATCCCC ACGAAGATGA GCCAATCGAA
GGCTATTCAC AAATCCTACC AATTGATCGT AGTCGCTACG AACGGCGCAA TGGTCTACGT
CGTTCCAGCT ACGAAAGCCG TTGGCACACC GATGTAACAG CAGCTATCAA CCCACCTGCG
GGGTCGATTT TGCGTGCTGT TAACGTTCCC AGTATTGGCG GTGACACCCA GTGGACTAAT
TTAGTTGCGG CATACGAAGG TTTGTCAGCA CCTGTGCGTG AGTTGGCAGA CAAATTGAAG
GCTGAACATC GTTTTAATGC ACGTTTGCGA CTACCCAGCA ACAGCAAGAT TGCCCAGCGC
ATTGCAGCGA ATCCCATTGT TTCCATTCAT CCAGTAGTGA GAGTTCATCC AGAAACAGGC
GAACGTGCAT TGTTTGTCAA TCCTGGTTTC ACCTCCCACA TTCTTGATGT ATCTCCCCAA
GAAAGTGAGT TGCTACTTGA GTTATTCTTT AACCAAATTA CCAAGCCAGC CTACACAACT
CGTTTCCGTT GGAATAATGG TGATATTGCT TTCTGGGATA ATCGTGCCAC TGCACATTTA
GCTCCTCAAG ATTTGGATCA TCTAGAAGTT GAGAGGGTGC TTTATCGCAC TACTATCACT
GGCGATGTCC CTGTTGGAGT CAACGGTTTC CGTTCCGAAA TAGTTGAAGG TGAGCTGTTT
ACCAGCGAAT TGCCAAATGC CTTGAAGAAT AAAGTTGAGA AGGTTGCACA ACCAGTGCTT
TCCTAG
 
Protein sequence
MGYKHIEVKP VSGFIGAEIG GVDLSTHLQD ETIQEIRKAL LKWKVVFFRN QNIDHAAQIA 
FTGRFGEVTY AHPHEDEPIE GYSQILPIDR SRYERRNGLR RSSYESRWHT DVTAAINPPA
GSILRAVNVP SIGGDTQWTN LVAAYEGLSA PVRELADKLK AEHRFNARLR LPSNSKIAQR
IAANPIVSIH PVVRVHPETG ERALFVNPGF TSHILDVSPQ ESELLLELFF NQITKPAYTT
RFRWNNGDIA FWDNRATAHL APQDLDHLEV ERVLYRTTIT GDVPVGVNGF RSEIVEGELF
TSELPNALKN KVEKVAQPVL S