Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2475 |
Symbol | lspA |
ID | 3682826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 3071745 |
End bp | 3072221 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637717818 |
Product | lipoprotein signal peptidase |
Protein accession | YP_322985 |
Protein GI | 75908689 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0597] Lipoprotein signal peptidase |
TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTTCA AAAATCGCCT TTTCTGGATA GCTGCCTTTA TTGCTTTCTT TGTAGACCAA CTGACCAAAT ATTGGGTCGT GCAAACCTTT AGCTTAGGAG AGACACTACC AATCTTACCG GGAATATTTC ACTTTACTTA CGTCACAAAT ACTGGTGCAG CTTTTAGTTT GTTTAGTGGA AAAGTAGAAT GGCTGCGCTG GTTATCTTTG GGAGTAAGTT TATTATTAAT AGGGTTGGCA TTGTTAGGCC CAGTTTTAGA ACGTTGGGAT CAACTCGGTT ATGGCTTGAT TCTGGGCGGC GCTATGGGTA ACGGGATTGA TCGGTTTGCT TTAGGTTATG TAGTTGATTT TCTAGATTTT CGCTTAATTA ATTTTGCCGT GTTTAATATG GCAGATTCAT TTATTAGTAT CGGTATTGTT TGCCTGCTAC TAGCCTCATT ACAGAAATCA CCTGATTCTC ATCACAGGTC TAGATAG
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Protein sequence | MRFKNRLFWI AAFIAFFVDQ LTKYWVVQTF SLGETLPILP GIFHFTYVTN TGAAFSLFSG KVEWLRWLSL GVSLLLIGLA LLGPVLERWD QLGYGLILGG AMGNGIDRFA LGYVVDFLDF RLINFAVFNM ADSFISIGIV CLLLASLQKS PDSHHRSR
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