Gene Ava_2448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2448 
Symbol 
ID3683091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3039241 
End bp3039882 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content45% 
IMG OID637717791 
Productketo-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase 
Protein accessionYP_322958 
Protein GI75908662 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase 
TIGRFAM ID[TIGR01182] Entner-Doudoroff aldolase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.698524 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACTC AAGATTGGTT ATCACAGTTG CAAAAACAGC GAGCGATCGC AGTCATCCGC 
GCCCCGAAAC TGGAATTAGG GTTGCAAATG GCTCTGGCTG TAGCTTCTGG GGGAATACAG
CTCATTGAAA TTACCTGGAA TAGCGATCGC CCAGGGGAAT TAATCACCAA ATTACGTGAG
CAGTTACCGG AATGTATTAT TGGTACTGGC ACATTATTTA ATTTGCAGCA ACTAGAAGAA
GCGATCGCCT GTGGGGCAGA ATTTCTATTT ACGCCTCATG TTGACTCAGT CATGATCAAA
GCATCTGTCA TCAAAAACAT ACCCATCATT CCCGGCGCAC TCACCCCTAC GGAAATTGTT
AATGCTTGGG CTAATGGTGC AAGTTGTGTC AAAGTATTCC CCGTGCAAGC TTTAGGGGGG
GCTGATTATA TTAAAAGTCT GCAAGGGCCT TTAGGTCATA TTCCCTTAAT TCCCACCGGG
GGGGTAACCC TGGAAAATGC CAAAAGACTA ATCCAAGCAG GTGCGATCGC CGTTGGTTTA
GGTGGAGAGT TATTTCCTCA GCAACTAGTG AAAGCGAAAA ATTGGCAAGC GATCGCCCAA
TTAGCCAGGA ACTTAACTCA AGAACTAAGC ATTATAACCT AA
 
Protein sequence
MSTQDWLSQL QKQRAIAVIR APKLELGLQM ALAVASGGIQ LIEITWNSDR PGELITKLRE 
QLPECIIGTG TLFNLQQLEE AIACGAEFLF TPHVDSVMIK ASVIKNIPII PGALTPTEIV
NAWANGASCV KVFPVQALGG ADYIKSLQGP LGHIPLIPTG GVTLENAKRL IQAGAIAVGL
GGELFPQQLV KAKNWQAIAQ LARNLTQELS IIT