Gene Ava_2430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2430 
Symbol 
ID3683073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3017693 
End bp3019093 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content44% 
IMG OID637717775 
Productdivalent cation transporter 
Protein accessionYP_322942 
Protein GI75908646 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2239] Mg/Co/Ni transporter MgtE (contains CBS domain) 
TIGRFAM ID[TIGR00400] Mg2+ transporter (mgtE) 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0143004 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGAGA CGAACAATTT AAACTCTACC CTTCAGGATG TGTCACGTAG GGAATTGCGT 
GATTTAGTGC GGACGCAGAT GCGAATGCTA TTAGAAGCAG GAGATTTACA GGGAGCAAAA
GCAATTCTTG TACCTGTACA GCCTGCGGAC ATAGCCGAAG CGATTGAAGG TTTGCCCGAA
ACGATGCACG CTTTAGCTTT TCGCTTGCTT TCTAAAGATG AAGCCATTGA AGTTTATGAA
TATCTTGATT ACAGTGTTCA AGAAAGATTA ATTGAAGAGC TAAAAAGCCA GGAAGTCCGC
GATATCGTTG ATCAAATGTC GTCGGATGAC CGAGCTAGAT TATTTGATGA ATTGCCTGCC
AAGGTTGTCA ATCACCTACT AGAACAACTT AGCCCAACAG AACGCCAAGC CACAGCCCTA
ATGTTGGGTT ATGAAGCCGA TACAGCCGGG CGCATCATGA CTCTAGAGTT CATTGGTCTG
AAAGAAAACA TGACCATAGG GCAAGCTCTA GAACGGATTC GCAGCCTCGC TAATGCTAGT
GAGATGATCT ACTATCTTTA CGTCACGGAT CAAGCTAGGC GCTTAACCGG CATTGTCTCA
CTGCGGGAGT TGGTGACATC CCAGCCAGAA CAGACTATTG GCGAAGTGAT GACCCGTGAT
GTAATTTTTG TCAATACAGA TACTCACCAG GAAGAAGTAG CTAAGTTAAT TCAAAGGTAT
GATTTCCTGG CTGTTCCGGT GGTAGACAGG CAACAGCTTT TAGTCGGGAT TGTCACTGTT
GATGATGTAA TTGATATTCT GGAAGAGGAA ACCACCAAAG ATATCTACGC TTTAGGGGGT
GGTGTGCAGT CCAGTGGCGA CAATTACTTT CAAATGGATT TATGGGAAGT AGCTCGCAAG
CGGGTTTTAT GGTTATTTGT TCTCTTAATC ACCAATACCG TCACCGGCAC AATTATTAAG
TCCCAAGAAG ATATCTTGAC AAAAGTAGTC ACCCTCACCG CCTTTATCCC CTTGTTAACT
GGTACTGGTG GTAACGTAGG CGCTCAGTCT TCCACAGTCG TGATTCGCGG GATGAATACA
GACGAAATTC GCTCACTTGG CACATTACAG GTAATTGGAC GAGAAGCGAT CGCTGGTGCA
TTGCTAGGAG GTATGTTAGG TAGTATCGCC ACTGTATGGG CTTACTTTCT CCAAGGTCGA
TTAGAAGTTG CGATCGCTGT TGGTGCTAGT TTAATCGCTA TCTCTGTTTT GGCTTCTATA
TCTGGTTCAG CACTGCCATT TTTGTTTCGC TACTTACGTT TAGATCCAGC CTTAATGTCA
GCACCTTTTA TTACTACAGC CGTTGACGTA CTTGGAGTTT TAATTTACTT CAATTTGGCA
AGAGTGATTT TACAATTGTG A
 
Protein sequence
MTETNNLNST LQDVSRRELR DLVRTQMRML LEAGDLQGAK AILVPVQPAD IAEAIEGLPE 
TMHALAFRLL SKDEAIEVYE YLDYSVQERL IEELKSQEVR DIVDQMSSDD RARLFDELPA
KVVNHLLEQL SPTERQATAL MLGYEADTAG RIMTLEFIGL KENMTIGQAL ERIRSLANAS
EMIYYLYVTD QARRLTGIVS LRELVTSQPE QTIGEVMTRD VIFVNTDTHQ EEVAKLIQRY
DFLAVPVVDR QQLLVGIVTV DDVIDILEEE TTKDIYALGG GVQSSGDNYF QMDLWEVARK
RVLWLFVLLI TNTVTGTIIK SQEDILTKVV TLTAFIPLLT GTGGNVGAQS STVVIRGMNT
DEIRSLGTLQ VIGREAIAGA LLGGMLGSIA TVWAYFLQGR LEVAIAVGAS LIAISVLASI
SGSALPFLFR YLRLDPALMS APFITTAVDV LGVLIYFNLA RVILQL