Gene Ava_2415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2415 
Symbol 
ID3683097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3002882 
End bp3003841 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content47% 
IMG OID637717760 
Productglycosyl transferase family protein 
Protein accessionYP_322927 
Protein GI75908631 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0859] ADP-heptose:LPS heptosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000869235 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000149362 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGAGTAG TAGCCCTTGT ACCTGGCGGA ATTGGCGATC AAATTCTGTT CTTTCCGACT 
CTAGACGATC TGAAGCGCTA TTACCCAAAC GCTCAGTTAG ATGTTGTAGT GGAACCCCGG
TCAAAGGCTG CCTACCGGGT GAGCAAGTCA GTAAACGACA TACTGACCTT CGATTACAAA
GACCGTAACA GCCTAGCAGA TTGGGGAAAT CTCGTAGGCA CAATTCGTGA TCGTGAGTAT
GATGTAGCGA TCGCTGTTGG ACAAAGCTGG TTAGTGGGTT TATTCCTCTG GTTAACAGGA
ATCCCCACCC GGATCGGCTA CCAAGGTAAA GGTGCATCAT TTCTGACCAA AACTGTACCC
TTCAAACCAT CCCAATACGC GGCGGCGGTT TACCACGACT TGCTGCAACC CTTTGGTATC
ACAACCCCTA CTCCAGAGTT AGCGGTAAAT GTGCCAAAAC CAGATATTGA CTGGGCAAAT
AGCGAACAAA AACGCCTTGG GGTTAGTGAA ACAGGTTACG TTTTGATTTA TGGTGGCTCT
AGCTGGGTAT CTCAGCCTCA AGCCTTGGAT TCAATTTACC CTGTGGAAAA CTGGCAGGAA
ATCATTCAAG ACTTTCGACA AAAGCAGCCA GATTTGCCTA TTGTAGTCAT ACAAGGCCCA
GATGATGAGC AATTTGTGCG ATCGCTCCGA GATTATTCTT TAGATATCAA GGTGACCTCC
CCTGATAACG TCGGTAAACT AACGGCGATG ATTGCTGGAG CTAACTTAAT GCTGACTACC
GATAGTGCGC CACTGCACTT AAGTGTGGCA GTACAAACCT ATACTATTGC TCTATTTGGT
TCCACAGACC CCGTCAAGTT ATTACCCCAA AGCGATAAAC TTCTGGGCAT TAAATCTCCC
ACAGGTAGGG TGGCAGATAT TTTACCCAAA GCTGTATTAG AAAAAGTTTG GGGAGGTTGA
 
Protein sequence
MRVVALVPGG IGDQILFFPT LDDLKRYYPN AQLDVVVEPR SKAAYRVSKS VNDILTFDYK 
DRNSLADWGN LVGTIRDREY DVAIAVGQSW LVGLFLWLTG IPTRIGYQGK GASFLTKTVP
FKPSQYAAAV YHDLLQPFGI TTPTPELAVN VPKPDIDWAN SEQKRLGVSE TGYVLIYGGS
SWVSQPQALD SIYPVENWQE IIQDFRQKQP DLPIVVIQGP DDEQFVRSLR DYSLDIKVTS
PDNVGKLTAM IAGANLMLTT DSAPLHLSVA VQTYTIALFG STDPVKLLPQ SDKLLGIKSP
TGRVADILPK AVLEKVWGG