Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2415 |
Symbol | |
ID | 3683097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 3002882 |
End bp | 3003841 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637717760 |
Product | glycosyl transferase family protein |
Protein accession | YP_322927 |
Protein GI | 75908631 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.000869235 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000149362 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGAGTAG TAGCCCTTGT ACCTGGCGGA ATTGGCGATC AAATTCTGTT CTTTCCGACT CTAGACGATC TGAAGCGCTA TTACCCAAAC GCTCAGTTAG ATGTTGTAGT GGAACCCCGG TCAAAGGCTG CCTACCGGGT GAGCAAGTCA GTAAACGACA TACTGACCTT CGATTACAAA GACCGTAACA GCCTAGCAGA TTGGGGAAAT CTCGTAGGCA CAATTCGTGA TCGTGAGTAT GATGTAGCGA TCGCTGTTGG ACAAAGCTGG TTAGTGGGTT TATTCCTCTG GTTAACAGGA ATCCCCACCC GGATCGGCTA CCAAGGTAAA GGTGCATCAT TTCTGACCAA AACTGTACCC TTCAAACCAT CCCAATACGC GGCGGCGGTT TACCACGACT TGCTGCAACC CTTTGGTATC ACAACCCCTA CTCCAGAGTT AGCGGTAAAT GTGCCAAAAC CAGATATTGA CTGGGCAAAT AGCGAACAAA AACGCCTTGG GGTTAGTGAA ACAGGTTACG TTTTGATTTA TGGTGGCTCT AGCTGGGTAT CTCAGCCTCA AGCCTTGGAT TCAATTTACC CTGTGGAAAA CTGGCAGGAA ATCATTCAAG ACTTTCGACA AAAGCAGCCA GATTTGCCTA TTGTAGTCAT ACAAGGCCCA GATGATGAGC AATTTGTGCG ATCGCTCCGA GATTATTCTT TAGATATCAA GGTGACCTCC CCTGATAACG TCGGTAAACT AACGGCGATG ATTGCTGGAG CTAACTTAAT GCTGACTACC GATAGTGCGC CACTGCACTT AAGTGTGGCA GTACAAACCT ATACTATTGC TCTATTTGGT TCCACAGACC CCGTCAAGTT ATTACCCCAA AGCGATAAAC TTCTGGGCAT TAAATCTCCC ACAGGTAGGG TGGCAGATAT TTTACCCAAA GCTGTATTAG AAAAAGTTTG GGGAGGTTGA
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Protein sequence | MRVVALVPGG IGDQILFFPT LDDLKRYYPN AQLDVVVEPR SKAAYRVSKS VNDILTFDYK DRNSLADWGN LVGTIRDREY DVAIAVGQSW LVGLFLWLTG IPTRIGYQGK GASFLTKTVP FKPSQYAAAV YHDLLQPFGI TTPTPELAVN VPKPDIDWAN SEQKRLGVSE TGYVLIYGGS SWVSQPQALD SIYPVENWQE IIQDFRQKQP DLPIVVIQGP DDEQFVRSLR DYSLDIKVTS PDNVGKLTAM IAGANLMLTT DSAPLHLSVA VQTYTIALFG STDPVKLLPQ SDKLLGIKSP TGRVADILPK AVLEKVWGG
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