Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2413 |
Symbol | |
ID | 3683095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 3001113 |
End bp | 3001646 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637717758 |
Product | condensin subunit ScpB |
Protein accession | YP_322925 |
Protein GI | 75908629 |
COG category | [K] Transcription |
COG ID | [COG1386] Predicted transcriptional regulator containing the HTH domain |
TIGRFAM ID | [TIGR00281] segregation and condensation protein B |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000000581218 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000885843 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAATACAG CCACAGCAAC GAAAATAGAA GCGATTCTTT ATCTGAAGGG TAAACCCTTA TCGGTCAGTG AGATTGCCGA GTATGCCGCG TGCGATCGCG CTACCGTAGA GGAAGGCATC ATTGAATTAA TGGACAGCTA CGCCCACCGA GATAGCGCCT TGGAAGTTGT AGAAACTACA GATGGTTACA GTTTACAACT ACGTTCAGAC TTCCAAGATT TAGTGCAGAC AATGATTCCT GTAGAATTGG GACTAGGTGC ATTGCGGACA TTAGCGGCGA TCGCCCTCAA TAGTCCCATC CTGCAAAGCG ACTTGATTGA GCTACGCGGT TCCGGTGTAT ATCAACACGT ACCAGAACTA GTTGAACTCG GTTTTGTGCG TAAGCGCCGA GATAATGAGT CCCGTTCCTA TTCGCTCCAA GTCACTCCAA AATTTCATCA ATATTTCCAA ATAGAGCAAC TTCCCCAACC CTTTGACAAC GACCAGAAAG AACAGCAGTT GGAACTAGAC TTAGCTGTGG GAGCAGGGGA GTAG
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Protein sequence | MNTATATKIE AILYLKGKPL SVSEIAEYAA CDRATVEEGI IELMDSYAHR DSALEVVETT DGYSLQLRSD FQDLVQTMIP VELGLGALRT LAAIALNSPI LQSDLIELRG SGVYQHVPEL VELGFVRKRR DNESRSYSLQ VTPKFHQYFQ IEQLPQPFDN DQKEQQLELD LAVGAGE
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