| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2410 |
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| Symbol | |
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| ID | 3683092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 2998069 |
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| End bp | 2998956 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637717755 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_322922 |
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| Protein GI | 75908626 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000688679 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000112748 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGACTGTTT CCTACCGTCT GCTTTTACTC TGTAGTTTAG TCAGCACTAT TGGACTGACG
ACCATACTCC CCCATGCGAG CAGGGTTAAC GCTGCTGTAG AGGGTTGCCC AATTCCCGCT
TTATCTCGCT TCAAGCGCCA TAAAGTAGTT CGTGGCGATA CGTTAGTAAC CATAGCCCAA
CGCTATAATC TCAGCCCAGA AACGCTGATT GGCATGAATC CATCTCTCCA TAATGGTTCT
TCCCCGGCTG TGGGTAGTGA ATTACAAATT CCTCCTTACA ACGGGGTGGT TGTGGAAGTG
CCTCAGGGTC AAACTTGGCG GCAGGTAGCG ACGAGATATA AAGTTCGTCC TGATACTCTA
TTTGAGATTA ATGGCTGTCA AGCAAATCCC AGAATTGTGT TTGTTCCAGG GGTAAATTGG
TCGCCTAATG GCTCTTTTAC CCAGTCTCCT AGACCTTCCA CAGCTAGAGC TTCTGCTCAG
TTAGCTGGCT ATCCTTTTCC CCAGGCTGTG GAGGTAGGCT TACCTTACGG TTGGCAGATT
AACCCTAATA CGGGTGAAGT ATTTTTCCAT AGTGGGGTGG ATTTATTGGC ATCAGTGGGG
ACTCCTGTTG AGGCGATCGC ACCAGGTACG GTAGTCTTTG CTAAGGAGCA GGGTACTTAC
GGTAATTTGG TCATCATCAA CCACAATGGC GGACTCCAAA GCCGCTACGC CCATCTTGGC
AGCATCAATG TTAAGGTTGG GCAAAAGGTT AATCAAGGCC AGTTACTCGG CACCGTCGGC
ACTACAGGAC AACCTACAGC CAAACAACCC CATCTTCATT TTGAAGTGCG TGCTAGTTCA
TCTCTAGGTT GGGTGGCAGA AAATCCTAAA GACTATTTGA AACCATAA
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| Protein sequence | MTVSYRLLLL CSLVSTIGLT TILPHASRVN AAVEGCPIPA LSRFKRHKVV RGDTLVTIAQ
RYNLSPETLI GMNPSLHNGS SPAVGSELQI PPYNGVVVEV PQGQTWRQVA TRYKVRPDTL
FEINGCQANP RIVFVPGVNW SPNGSFTQSP RPSTARASAQ LAGYPFPQAV EVGLPYGWQI
NPNTGEVFFH SGVDLLASVG TPVEAIAPGT VVFAKEQGTY GNLVIINHNG GLQSRYAHLG
SINVKVGQKV NQGQLLGTVG TTGQPTAKQP HLHFEVRASS SLGWVAENPK DYLKP
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