Gene Ava_2409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2409 
Symbol 
ID3683208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2997006 
End bp2998028 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content38% 
IMG OID637717754 
Producthypothetical protein 
Protein accessionYP_322921 
Protein GI75908625 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000136883 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000184258 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGCTAC CTATACCCCC GCACTTTAAC TCAGCAAAAG TTGGCGAAGT TTGGCGAGTA 
CCTTACCAAG AACGTGCAGC AGAAGCGGAA GCATGGGCAA AACAACACAA CATCCAACCA
GCAGCTTTTG ATAAAACTCG TATTTGTTTA TTACTAATAG ATGTCCAGAA CACCTTTTGC
ATCCCAGAAT TTGAATTATT TGTGGGTGGT GAATCTGGGA CTGGTGCTGT AGATGATAAT
CGCAGAATAT GTGAATTTAT TTATCACAAC TTGGGTCTAA TCACAAAAAT TATTCCTACC
TTAGATACCC ATACCGCCAT GCAGATTTTT CATCCTATAT TTTGGGTGAA TGAGTTAGGC
GAACATCCTA CACCAGCAGC TACTAGTATT ACTCTTACAG ATATTGAGAA AGGGATTTGG
AAAGTTAACC CAGATGTGGC GAACAGTATT ACTCATGGGG ATTATGAATT ATTAGAAAAA
CACGCTTATC ACTATGTAAA ACAACTAAGC CAAGATGGGA AATATCCTTT GACTGTTTGG
CCTTACCATT CTATGTTGGG TGGTATTGGT CATGCGTTAG TTTCTGCTGT GGAAGAAGCC
ATATTTTTTC ATGGTATAGC TCGTCACAGT CAAACACAGT TTGAGATTAA GGGTGACAAT
CCGTTAACAG AAAATTATTC TGTGTTACGT CCAGAAGTCT TAGTTGGTTT TGATAAAAAT
CCCCTAGCTG ATAAGAATCA AAAATTAATT AAGCAGCTTT TAGAATTTGA TGCTGTGATT
ATTGCCGGAC AAGCAAAAAG CCATTGCGTT GCTTGGACAA TTGATGATTT ATTAACAGAA
ATTCAACAAG TAGATACAGC CCTTGCTAAA AAAGTTTATT TACTAGAAGA TGCTTCTTCT
CCTGTTGTAG TTCCTGGTGT TGTAGATTAT ACAGAACAAG CAGATGCCGC ATTTGCTAAG
TTCCAAGCAG CAGGGATGCA AATTGTTAAA TCTACTGAAC CTATCGATAA ATGGTTACAG
TAA
 
Protein sequence
MQLPIPPHFN SAKVGEVWRV PYQERAAEAE AWAKQHNIQP AAFDKTRICL LLIDVQNTFC 
IPEFELFVGG ESGTGAVDDN RRICEFIYHN LGLITKIIPT LDTHTAMQIF HPIFWVNELG
EHPTPAATSI TLTDIEKGIW KVNPDVANSI THGDYELLEK HAYHYVKQLS QDGKYPLTVW
PYHSMLGGIG HALVSAVEEA IFFHGIARHS QTQFEIKGDN PLTENYSVLR PEVLVGFDKN
PLADKNQKLI KQLLEFDAVI IAGQAKSHCV AWTIDDLLTE IQQVDTALAK KVYLLEDASS
PVVVPGVVDY TEQADAAFAK FQAAGMQIVK STEPIDKWLQ