Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2406 |
Symbol | psaB |
ID | 3683205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 2993074 |
End bp | 2995299 |
Gene Length | 2226 bp |
Protein Length | 741 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637717751 |
Product | photosystem I P700 chlorophyll a apoprotein A2 |
Protein accession | YP_322918 |
Protein GI | 75908622 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01336] photosystem I core protein PsaB |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.185378 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000443533 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAACAA AATTTCCAAA ATTTAGCCAG GATCTAGCAC AGGACCCAAC TACCCGTCGC ATTTGGTATG CGATGGCTAT GGGCAACGAC TTTGAAAGCC ACGATGGCAT GACCGAAGAA AATCTTTACC AAAAGATTTT CGCTACTCAC TTCGGTCACC TGGCAATCAT TTTCTTATGG GCTTCTAGCC TCCTGTTCCA TGTAGCCTGG CAAGGTAACT TTGAACAGTG GATTAAAGAT CCTCTACACG TCCGCCCAAT TGCTCACGCG ATTTGGGACC CCCACTTCGG TAAACCAGCT ATTGAAGCTT TTACCCAAGC TGGTGCTAAC GGCCCAGTAA ACATTGCTTA CTCTGGTGTT TACCACTGGT GGTACACCAT CGGTATGCGG ACAAACACCG AACTATATAC AGGTTCAGTC TTCCTGTTGT TGTTCGCGTC CTTGTTCTTG TTTGCTGGTT GGTTGCATTT ACAACCCAAG TTCCGTCCTA GCCTAGCTTG GTTTAAGAGT GCTGAATCTC GTCTGAACCA CCACTTAGCA GGTTTGTTCG GCGTTAGCTC TCTAGCTTGG GCCGGTCACT TGATTCACGT TGCTATCCCC GAATCTCGCG GACAGCACGT AGGTTGGGAT AACTTCTTAA CCACAGCGCC CCACCCAGCA GGCTTACAAC CCTTCTTCAC AGGCAACTGG GGTGTTTACG CTCAAAACCC TGATACAGCA GGTCACATTT TCAGTACCTC TCAAGGTTCT GGTACAGCAA TTCTGACCTT TTTGGGTGGT TTCCATCCTC AAACAGAATC CCTGTGGTTG ACAGACATAG CTCATCACCA CTTGGCGATC GCTGTACTAT TCATTGTTGC TGGTCATATG TACCGTACCA ACTTCGGTAT TGGTCACAGC ATCAAAGAAA TGATGAATGC CAAAACTTTC TTTGGCAAAC CTGTTGAAGG TCCCTTCAAT ATGCCTCACC AAGGCATTTA TGACACCTAC AACAACTCTC TGCACTTCCA ATTAGGTTGG CACCTAGCTT GTTTGGGTGT TGTTACCTCT TGGGTGGCGC AGCATATGTA CTCTCTGCCT TCCTACGCAT TCATTGCTAA GGACTACACA ACACAGGCAG CACTGTACAC CCACCACCAA TACATAGCCA TTTTCTTAAT GGTTGGTGCT TTTGCTCACG GTGCTATCTT CTTAGTCCGT GACTACGATC CTGAACAAAA CAAAGGTAAC GTGCTTGAGC GTGTGCTACA GCACAAAGAA GCGATTATCT CCCACCTCAG CTGGGTATCG CTATTCTTAG GCTTCCACAC CTTAGGCTTA TACGTCCACA ACGACGTAGT AGTTGCTTTC GGAACACCTG AAAAGCAAAT CTTGATTGAG CCAGTATTTG CTCAGTTCAT TCAAGCTGCT CACGGTAAGG TACTCTACGG CTTAGATACA TTGCTGTCTA ACCCCGATAG CGTTGCCTAC ACAGCCTATC CTAACTACGC CAACGTTTGG CTACCAGGCT GGTTAGATGC CATTAACTCT GGTACTAACT CCCTGTTCTT AACAATTGGC CCTGGCGACT TCTTGGTACA CCATGCGATC GCCTTAGGTC TGCACACCAC CACCCTCATC CTAGTCAAAG GTGCTTTGGA TGCTCGTGGT TCCAAGCTGA TGCCGGATAA AAAGGACTTC GGCTATGCCT TCCCTTGCGA CGGTCCAGGC CGTGGCGGTA CTTGCGACAT CTCCGCTTGG GACTCCTTCT ACCTATCTTT ATTCTGGGCG TTAAATACAG TAGGTTGGGT AACATTCTAC TGGCACTGGA AACATTTAGG TATTTGGCAA GGTAACGTTG CTCAGTTCAA CGAAAATTCC ACCTACCTCA TGGGCTGGTT CCGTGACTAC CTCTGGGCTA ACTCTGCTCA GTTGATCAAC GGTTACAACC CCTACGGTGT GAACAACCTG TCTGTCTGGG CGTGGATGTT CCTCTTCGGA CACCTAGTTT GGGCTACTGG CTTCATGTTC CTCATCTCCT GGAGAGGTTA CTGGCAAGAG TTGATCGAAA CCCTAGTTTG GGCGCACGAA CGTACTCCTA TCGCTAACCT AATTCGCTGG AAAGACAAGC CAGTTGCTCT CTCCATCGTT CAAGCTCGTG TAGTTGGTCT AGCTCACTTC ACCGTCGGCT ATGTCCTCAC CTACGCAGCC TTCCTCATCG CCTCCACTGC TGGTAAGTTC GGTTGA
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Protein sequence | MATKFPKFSQ DLAQDPTTRR IWYAMAMGND FESHDGMTEE NLYQKIFATH FGHLAIIFLW ASSLLFHVAW QGNFEQWIKD PLHVRPIAHA IWDPHFGKPA IEAFTQAGAN GPVNIAYSGV YHWWYTIGMR TNTELYTGSV FLLLFASLFL FAGWLHLQPK FRPSLAWFKS AESRLNHHLA GLFGVSSLAW AGHLIHVAIP ESRGQHVGWD NFLTTAPHPA GLQPFFTGNW GVYAQNPDTA GHIFSTSQGS GTAILTFLGG FHPQTESLWL TDIAHHHLAI AVLFIVAGHM YRTNFGIGHS IKEMMNAKTF FGKPVEGPFN MPHQGIYDTY NNSLHFQLGW HLACLGVVTS WVAQHMYSLP SYAFIAKDYT TQAALYTHHQ YIAIFLMVGA FAHGAIFLVR DYDPEQNKGN VLERVLQHKE AIISHLSWVS LFLGFHTLGL YVHNDVVVAF GTPEKQILIE PVFAQFIQAA HGKVLYGLDT LLSNPDSVAY TAYPNYANVW LPGWLDAINS GTNSLFLTIG PGDFLVHHAI ALGLHTTTLI LVKGALDARG SKLMPDKKDF GYAFPCDGPG RGGTCDISAW DSFYLSLFWA LNTVGWVTFY WHWKHLGIWQ GNVAQFNENS TYLMGWFRDY LWANSAQLIN GYNPYGVNNL SVWAWMFLFG HLVWATGFMF LISWRGYWQE LIETLVWAHE RTPIANLIRW KDKPVALSIV QARVVGLAHF TVGYVLTYAA FLIASTAGKF G
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