| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2406 |
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| Symbol | psaB |
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| ID | 3683205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 2993074 |
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| End bp | 2995299 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637717751 |
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| Product | photosystem I P700 chlorophyll a apoprotein A2 |
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| Protein accession | YP_322918 |
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| Protein GI | 75908622 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01336] photosystem I core protein PsaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.185378 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000443533 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAACAA AATTTCCAAA ATTTAGCCAG GATCTAGCAC AGGACCCAAC TACCCGTCGC
ATTTGGTATG CGATGGCTAT GGGCAACGAC TTTGAAAGCC ACGATGGCAT GACCGAAGAA
AATCTTTACC AAAAGATTTT CGCTACTCAC TTCGGTCACC TGGCAATCAT TTTCTTATGG
GCTTCTAGCC TCCTGTTCCA TGTAGCCTGG CAAGGTAACT TTGAACAGTG GATTAAAGAT
CCTCTACACG TCCGCCCAAT TGCTCACGCG ATTTGGGACC CCCACTTCGG TAAACCAGCT
ATTGAAGCTT TTACCCAAGC TGGTGCTAAC GGCCCAGTAA ACATTGCTTA CTCTGGTGTT
TACCACTGGT GGTACACCAT CGGTATGCGG ACAAACACCG AACTATATAC AGGTTCAGTC
TTCCTGTTGT TGTTCGCGTC CTTGTTCTTG TTTGCTGGTT GGTTGCATTT ACAACCCAAG
TTCCGTCCTA GCCTAGCTTG GTTTAAGAGT GCTGAATCTC GTCTGAACCA CCACTTAGCA
GGTTTGTTCG GCGTTAGCTC TCTAGCTTGG GCCGGTCACT TGATTCACGT TGCTATCCCC
GAATCTCGCG GACAGCACGT AGGTTGGGAT AACTTCTTAA CCACAGCGCC CCACCCAGCA
GGCTTACAAC CCTTCTTCAC AGGCAACTGG GGTGTTTACG CTCAAAACCC TGATACAGCA
GGTCACATTT TCAGTACCTC TCAAGGTTCT GGTACAGCAA TTCTGACCTT TTTGGGTGGT
TTCCATCCTC AAACAGAATC CCTGTGGTTG ACAGACATAG CTCATCACCA CTTGGCGATC
GCTGTACTAT TCATTGTTGC TGGTCATATG TACCGTACCA ACTTCGGTAT TGGTCACAGC
ATCAAAGAAA TGATGAATGC CAAAACTTTC TTTGGCAAAC CTGTTGAAGG TCCCTTCAAT
ATGCCTCACC AAGGCATTTA TGACACCTAC AACAACTCTC TGCACTTCCA ATTAGGTTGG
CACCTAGCTT GTTTGGGTGT TGTTACCTCT TGGGTGGCGC AGCATATGTA CTCTCTGCCT
TCCTACGCAT TCATTGCTAA GGACTACACA ACACAGGCAG CACTGTACAC CCACCACCAA
TACATAGCCA TTTTCTTAAT GGTTGGTGCT TTTGCTCACG GTGCTATCTT CTTAGTCCGT
GACTACGATC CTGAACAAAA CAAAGGTAAC GTGCTTGAGC GTGTGCTACA GCACAAAGAA
GCGATTATCT CCCACCTCAG CTGGGTATCG CTATTCTTAG GCTTCCACAC CTTAGGCTTA
TACGTCCACA ACGACGTAGT AGTTGCTTTC GGAACACCTG AAAAGCAAAT CTTGATTGAG
CCAGTATTTG CTCAGTTCAT TCAAGCTGCT CACGGTAAGG TACTCTACGG CTTAGATACA
TTGCTGTCTA ACCCCGATAG CGTTGCCTAC ACAGCCTATC CTAACTACGC CAACGTTTGG
CTACCAGGCT GGTTAGATGC CATTAACTCT GGTACTAACT CCCTGTTCTT AACAATTGGC
CCTGGCGACT TCTTGGTACA CCATGCGATC GCCTTAGGTC TGCACACCAC CACCCTCATC
CTAGTCAAAG GTGCTTTGGA TGCTCGTGGT TCCAAGCTGA TGCCGGATAA AAAGGACTTC
GGCTATGCCT TCCCTTGCGA CGGTCCAGGC CGTGGCGGTA CTTGCGACAT CTCCGCTTGG
GACTCCTTCT ACCTATCTTT ATTCTGGGCG TTAAATACAG TAGGTTGGGT AACATTCTAC
TGGCACTGGA AACATTTAGG TATTTGGCAA GGTAACGTTG CTCAGTTCAA CGAAAATTCC
ACCTACCTCA TGGGCTGGTT CCGTGACTAC CTCTGGGCTA ACTCTGCTCA GTTGATCAAC
GGTTACAACC CCTACGGTGT GAACAACCTG TCTGTCTGGG CGTGGATGTT CCTCTTCGGA
CACCTAGTTT GGGCTACTGG CTTCATGTTC CTCATCTCCT GGAGAGGTTA CTGGCAAGAG
TTGATCGAAA CCCTAGTTTG GGCGCACGAA CGTACTCCTA TCGCTAACCT AATTCGCTGG
AAAGACAAGC CAGTTGCTCT CTCCATCGTT CAAGCTCGTG TAGTTGGTCT AGCTCACTTC
ACCGTCGGCT ATGTCCTCAC CTACGCAGCC TTCCTCATCG CCTCCACTGC TGGTAAGTTC
GGTTGA
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| Protein sequence | MATKFPKFSQ DLAQDPTTRR IWYAMAMGND FESHDGMTEE NLYQKIFATH FGHLAIIFLW
ASSLLFHVAW QGNFEQWIKD PLHVRPIAHA IWDPHFGKPA IEAFTQAGAN GPVNIAYSGV
YHWWYTIGMR TNTELYTGSV FLLLFASLFL FAGWLHLQPK FRPSLAWFKS AESRLNHHLA
GLFGVSSLAW AGHLIHVAIP ESRGQHVGWD NFLTTAPHPA GLQPFFTGNW GVYAQNPDTA
GHIFSTSQGS GTAILTFLGG FHPQTESLWL TDIAHHHLAI AVLFIVAGHM YRTNFGIGHS
IKEMMNAKTF FGKPVEGPFN MPHQGIYDTY NNSLHFQLGW HLACLGVVTS WVAQHMYSLP
SYAFIAKDYT TQAALYTHHQ YIAIFLMVGA FAHGAIFLVR DYDPEQNKGN VLERVLQHKE
AIISHLSWVS LFLGFHTLGL YVHNDVVVAF GTPEKQILIE PVFAQFIQAA HGKVLYGLDT
LLSNPDSVAY TAYPNYANVW LPGWLDAINS GTNSLFLTIG PGDFLVHHAI ALGLHTTTLI
LVKGALDARG SKLMPDKKDF GYAFPCDGPG RGGTCDISAW DSFYLSLFWA LNTVGWVTFY
WHWKHLGIWQ GNVAQFNENS TYLMGWFRDY LWANSAQLIN GYNPYGVNNL SVWAWMFLFG
HLVWATGFMF LISWRGYWQE LIETLVWAHE RTPIANLIRW KDKPVALSIV QARVVGLAHF
TVGYVLTYAA FLIASTAGKF G
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