Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2402 |
Symbol | |
ID | 3683201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 2985628 |
End bp | 2987487 |
Gene Length | 1860 bp |
Protein Length | 619 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637717747 |
Product | sensor protein |
Protein accession | YP_322914 |
Protein GI | 75908618 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4252] Predicted transmembrane sensor domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.532539 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000375596 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATGCAAC CTGGACTTTG GAGCGGAATT AAAGCAGAAA TTGCCATTTG GCGCGTAGGT ATATTACCAG GATTAGCAGT CATTGGACTA GTCACCTTTA CAAGACTTTT TGGTTCGCTA GAGTCCTTAG AATGGATGGC TTTGGATAGT TTTCTCCGTT GGCGCTCAGA AGAACCTATA GATGCACGAA TTCTGTTAGT AGAAATTAAT CAAGGTGATA ATTATTCTCT AACATCAACT ATATCAGATA GTGGTTTTGT AGGGCTGCTG GAGAAGTTAC AAGTTTATCA GCCTAAAGTT ATCGGTCTAA ATATTGATCG GAATTTACTC ATCAATTCTC CAGAGGATGA CCTGGTCAAG CTTTTTCAAA AGTACAGAAA TTTAATTGCT ACTGAAAACA TTTTACCTGC CCAGATTCAT TCGCATCTAG ATTTGCCTCC TGAACAGATT GCTTTTGCAG ACCAAATTCT AGATAGTGAC GGTAAGGCGA GACGTAGTCT ATTGGCAATT AATACATCTA ATGGCTATAA ATTATCTTTT GCTATGCGAT TAGCAAGAAT TTATTTAGCC CAGGAAAATA TTAGTTTAGA AAGTAGTCAG TTGGGAAAAA CGAAACTACC CCGCTTTTTA CCAAACTCTG GAGGATATAT CCGTGCTGAT GCCAGTGGAT TTCAAGTACT AATAAATTTC CGTAGTGGCA CCAGAAGATT TAGAACTTTA TCTGGGGAGG ACATTAAAAA TGGTAAATTT AACCCTGAAT GGATACGCGA TCGCATAGTC ATTATCGGTA TTACAAATAC TCATAGTCAG GACTTTATCC CAACTTCAGC GATTACATCA ATTAAATCAG CCCCCAAGCA AGTTAACACA TTGGAAATCC AAGCACACGC CATCAGTCAA ATTATTAGTG CTGTGCTTGA TGGTAGACCA CTAATTAATA CTTGGAATGA TGGATGGGAA TATACTTGGA TTTTTGTTTG GGGTTTTTTA GGAATAGTGA TTGCTAGGTT CACTAAATCC CCACTAGTAA ATTTTTTGGT TGTGGGAATA ACTATCACTA GTCTACTAGT AATTAGTTAC CTACTATTAA TTTGGGGGTG GTGGGTTCCA GTCATACCTG CAATTTTAGT CTTGACCATA AATGGTATGG AACTGATAGC ATTATATCAA TACGACCAAG CTTTACGCTT AGGGATGAAA ACGCGTCAAG ACGTAATAGA AAGTACCTTT GAAACCATCC ATAATGGACC ACTACAAAGT TTAGCCCAAG TTTTAAAATT GATACGCTGC GAAAATACCA ATACTCAGGA ATTGCTCCCA AAGATTGAAA AAGAACTAGA GAAATTAAAT CATGAGCTAC GAGGAATTTA CGAATTCTTG CAGCAAGAAT ATCCCAGTCA AGATATCAAA CTGTATTTAG GTAATAATTT AGTCCTTAGT TTGCAAGATC CACTACACGA AGTCCTCTAT CAAGTTTACA GTTATACTTT AGATAGAGAG TTTCCTTGCT TTAAAACAAT TAAAGTTGCC ATACGTAGCT TTGAACCAAT AGATGAAAAA AGTTTAAGTA TGGAACAAAA ACGAGGAATT TGTAGATTTT TAGAAGAAGC TTTATGTAAT GTAGGTAAAC ACGCTACCGG AGTCACTAAA CTCCAAGTCA CTTGCTCATT AATAGCAGGT TGGTACACGT TGAAAATTAT AGATAATGGC TTAGGCGTAA ATTCATCCAA AAAAGGACGA GGAACCCAAC AGTTTATCAA TTTAGCACGA CAACTACGGG GAAAATTCCA GCGATCGCCC CAAATCCCCC AAGGAACCAT CTGCGAATTA TCTTGGCCAG TCAGTCAGTT TTGGAGATAG
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Protein sequence | MMQPGLWSGI KAEIAIWRVG ILPGLAVIGL VTFTRLFGSL ESLEWMALDS FLRWRSEEPI DARILLVEIN QGDNYSLTST ISDSGFVGLL EKLQVYQPKV IGLNIDRNLL INSPEDDLVK LFQKYRNLIA TENILPAQIH SHLDLPPEQI AFADQILDSD GKARRSLLAI NTSNGYKLSF AMRLARIYLA QENISLESSQ LGKTKLPRFL PNSGGYIRAD ASGFQVLINF RSGTRRFRTL SGEDIKNGKF NPEWIRDRIV IIGITNTHSQ DFIPTSAITS IKSAPKQVNT LEIQAHAISQ IISAVLDGRP LINTWNDGWE YTWIFVWGFL GIVIARFTKS PLVNFLVVGI TITSLLVISY LLLIWGWWVP VIPAILVLTI NGMELIALYQ YDQALRLGMK TRQDVIESTF ETIHNGPLQS LAQVLKLIRC ENTNTQELLP KIEKELEKLN HELRGIYEFL QQEYPSQDIK LYLGNNLVLS LQDPLHEVLY QVYSYTLDRE FPCFKTIKVA IRSFEPIDEK SLSMEQKRGI CRFLEEALCN VGKHATGVTK LQVTCSLIAG WYTLKIIDNG LGVNSSKKGR GTQQFINLAR QLRGKFQRSP QIPQGTICEL SWPVSQFWR
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