Gene Ava_2402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2402 
Symbol 
ID3683201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2985628 
End bp2987487 
Gene Length1860 bp 
Protein Length619 aa 
Translation table11 
GC content38% 
IMG OID637717747 
Productsensor protein 
Protein accessionYP_322914 
Protein GI75908618 
COG category[T] Signal transduction mechanisms 
COG ID[COG4252] Predicted transmembrane sensor domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.532539 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000375596 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGCAAC CTGGACTTTG GAGCGGAATT AAAGCAGAAA TTGCCATTTG GCGCGTAGGT 
ATATTACCAG GATTAGCAGT CATTGGACTA GTCACCTTTA CAAGACTTTT TGGTTCGCTA
GAGTCCTTAG AATGGATGGC TTTGGATAGT TTTCTCCGTT GGCGCTCAGA AGAACCTATA
GATGCACGAA TTCTGTTAGT AGAAATTAAT CAAGGTGATA ATTATTCTCT AACATCAACT
ATATCAGATA GTGGTTTTGT AGGGCTGCTG GAGAAGTTAC AAGTTTATCA GCCTAAAGTT
ATCGGTCTAA ATATTGATCG GAATTTACTC ATCAATTCTC CAGAGGATGA CCTGGTCAAG
CTTTTTCAAA AGTACAGAAA TTTAATTGCT ACTGAAAACA TTTTACCTGC CCAGATTCAT
TCGCATCTAG ATTTGCCTCC TGAACAGATT GCTTTTGCAG ACCAAATTCT AGATAGTGAC
GGTAAGGCGA GACGTAGTCT ATTGGCAATT AATACATCTA ATGGCTATAA ATTATCTTTT
GCTATGCGAT TAGCAAGAAT TTATTTAGCC CAGGAAAATA TTAGTTTAGA AAGTAGTCAG
TTGGGAAAAA CGAAACTACC CCGCTTTTTA CCAAACTCTG GAGGATATAT CCGTGCTGAT
GCCAGTGGAT TTCAAGTACT AATAAATTTC CGTAGTGGCA CCAGAAGATT TAGAACTTTA
TCTGGGGAGG ACATTAAAAA TGGTAAATTT AACCCTGAAT GGATACGCGA TCGCATAGTC
ATTATCGGTA TTACAAATAC TCATAGTCAG GACTTTATCC CAACTTCAGC GATTACATCA
ATTAAATCAG CCCCCAAGCA AGTTAACACA TTGGAAATCC AAGCACACGC CATCAGTCAA
ATTATTAGTG CTGTGCTTGA TGGTAGACCA CTAATTAATA CTTGGAATGA TGGATGGGAA
TATACTTGGA TTTTTGTTTG GGGTTTTTTA GGAATAGTGA TTGCTAGGTT CACTAAATCC
CCACTAGTAA ATTTTTTGGT TGTGGGAATA ACTATCACTA GTCTACTAGT AATTAGTTAC
CTACTATTAA TTTGGGGGTG GTGGGTTCCA GTCATACCTG CAATTTTAGT CTTGACCATA
AATGGTATGG AACTGATAGC ATTATATCAA TACGACCAAG CTTTACGCTT AGGGATGAAA
ACGCGTCAAG ACGTAATAGA AAGTACCTTT GAAACCATCC ATAATGGACC ACTACAAAGT
TTAGCCCAAG TTTTAAAATT GATACGCTGC GAAAATACCA ATACTCAGGA ATTGCTCCCA
AAGATTGAAA AAGAACTAGA GAAATTAAAT CATGAGCTAC GAGGAATTTA CGAATTCTTG
CAGCAAGAAT ATCCCAGTCA AGATATCAAA CTGTATTTAG GTAATAATTT AGTCCTTAGT
TTGCAAGATC CACTACACGA AGTCCTCTAT CAAGTTTACA GTTATACTTT AGATAGAGAG
TTTCCTTGCT TTAAAACAAT TAAAGTTGCC ATACGTAGCT TTGAACCAAT AGATGAAAAA
AGTTTAAGTA TGGAACAAAA ACGAGGAATT TGTAGATTTT TAGAAGAAGC TTTATGTAAT
GTAGGTAAAC ACGCTACCGG AGTCACTAAA CTCCAAGTCA CTTGCTCATT AATAGCAGGT
TGGTACACGT TGAAAATTAT AGATAATGGC TTAGGCGTAA ATTCATCCAA AAAAGGACGA
GGAACCCAAC AGTTTATCAA TTTAGCACGA CAACTACGGG GAAAATTCCA GCGATCGCCC
CAAATCCCCC AAGGAACCAT CTGCGAATTA TCTTGGCCAG TCAGTCAGTT TTGGAGATAG
 
Protein sequence
MMQPGLWSGI KAEIAIWRVG ILPGLAVIGL VTFTRLFGSL ESLEWMALDS FLRWRSEEPI 
DARILLVEIN QGDNYSLTST ISDSGFVGLL EKLQVYQPKV IGLNIDRNLL INSPEDDLVK
LFQKYRNLIA TENILPAQIH SHLDLPPEQI AFADQILDSD GKARRSLLAI NTSNGYKLSF
AMRLARIYLA QENISLESSQ LGKTKLPRFL PNSGGYIRAD ASGFQVLINF RSGTRRFRTL
SGEDIKNGKF NPEWIRDRIV IIGITNTHSQ DFIPTSAITS IKSAPKQVNT LEIQAHAISQ
IISAVLDGRP LINTWNDGWE YTWIFVWGFL GIVIARFTKS PLVNFLVVGI TITSLLVISY
LLLIWGWWVP VIPAILVLTI NGMELIALYQ YDQALRLGMK TRQDVIESTF ETIHNGPLQS
LAQVLKLIRC ENTNTQELLP KIEKELEKLN HELRGIYEFL QQEYPSQDIK LYLGNNLVLS
LQDPLHEVLY QVYSYTLDRE FPCFKTIKVA IRSFEPIDEK SLSMEQKRGI CRFLEEALCN
VGKHATGVTK LQVTCSLIAG WYTLKIIDNG LGVNSSKKGR GTQQFINLAR QLRGKFQRSP
QIPQGTICEL SWPVSQFWR