| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2398 |
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| Symbol | |
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| ID | 3683197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 2980031 |
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| End bp | 2982181 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637717743 |
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| Product | bacteriocin-processing peptidase |
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| Protein accession | YP_322910 |
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| Protein GI | 75908614 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0391365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000309205 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAATACG CTCACGTTCA ACAACATAGT CAAGAAGATT GTGGTGCGGC TTGTCTAGCA
TCGATAGCCA AACATTATGG ACGCACTTTT ACTCTCAACC GCATCCGTGA AGCTGTAGGG
ACAGGACAAT TTGGTACAAC TTTATTGGGT TTAAAACGAG GTGCAGAAAC ACTAGGTTTT
AATGCACGTT CTGTTAAAAC TTCACCGGAA CTTTTAAACC AAATTAATGA AGCGCGGTTA
CCAGCAATTA TTCACTGGAA AGGGAATCAC TGGGTTGTTT TCTATGGTAA AAAAGGCAAA
AAATGTGTAA TTTCTGACCC AGCAGTTGGT ATTCGCTATC TATCTGAAAA AGATTTAGTT
GAAGGTTGGA CGGATTGGTT GATGTTGTTG GTAGAACCCA ATCCAGAATT GTTTTGGAAA
CTGGAAGATG ACAAAGTTAG TGGCTTTTGG CGTTTCTTTA AGCGTGTTTG GCATTTTCGC
AGTCTTATAG CCCAAGTTAT TCCCCTTAAT TTACTATTAG GAATTTTATC TTTAGCCTCT
CCATTTCTCT TACAAATTCT GACTGATGAT ATTTTAATTC GGGGTGATAC AAGACTACTG
ACTACTATGG CGATAGGTGT ATTCGTCATG AATTTGATTT CTGGTAGTCT GGCTTGGGTT
CAATCTAATT TAATCGCTCA TTTTGCCCAA CGATTACAAT TAGGATTGGT CTTAGAATTT
TGTCGGCAAA TTCTCCAATT GCCACTATCA TATTATGAAG CCCGACGCAG TGGCGAAATT
ATTAGTCGCC TCCGAGATAT TAACCAAATT AACCAGTTAG TAGCTCAAGT AGTTATCAGT
CTACCTAGTC GATTTTTTAT TGCTGTTATT TCTTTCTGTA TCATGGTCTT TTACAGCTGG
AAGCTAACTG TGGTAGCCAT GATTGTGTCT GTGTTTATGA CTATATCTAC GATTGTGTTT
CTGCCAACTT TACAGCAGAA AACTCGTGAA CTTTTAATTA AAGATGCGGA AGCGCAAGGT
GTTTTAGTAG AAACTTTTAA AGGCGCTCTC ACAGTCAAAA CTACCACAGC TAGCCCACAT
TTTTTAGATG AACTACAAAG TCGGTTTGGT CATCTTGCTA ATGTAACGTT ACGTACAATT
CAAATCGGCA TTATTAATGG TACATTTTCA GGTTTGGTTT CTGGGATTGG TTCGATAGCA
TTACTCTGGG TTGGTGGTAA TTTAGTAATT AATCCGGCAG AAAATTTGAG TATTGGGAAG
CTACTAGCTT TTAACTCAAT GAACGGAAAT TTTCTAGGAT TAATCGGTAC TGTAATAGGT
TTTGTTGATG AATTTACTAC CGCAAAAACT GCCGTGCAAC GCCTCACGGA AATCATAGAT
ACCACACCTG AAAATGAAGG TGATGGGAAA AAGCCTTTTA CTACAATCTC TGGTGATGCT
GACATTATTT GCACAAATGT CAACTTTCAC TATACCGGTC GAGTTGACTT ACTAGAAGAC
TTTACGTTGA CAATTCCTGG TGGTAAAGTC ACTGCTATTA TCGGCAAATC AGGATGCGGT
AAAAGTACTG TCGCTAAATT AATTACTAGT TTATATACCC TACAATCTGG GAATATTCGG
ATTGGACTAT ATAACCTACA AGATATAGCC CTTGACTGTC TACGTCAGCA AGTGGTTTTA
GTTCCTCAAG ATGCTCATTT TTGGAGTCGT TCCATTATTG AAAACTTTCG CTTAGGAGCG
CCATTTGTTA CATTTGAGCA AATTGTCAGA GCTTGTCAAG TTACAGGAGC CGATGAATTT
ATTAGTAGAT TTCCTGATAA ATATCAAACG ATTTTAGGAG AATTTGGGGC AAATATCTCT
GGTGGACAAC GCCAACGCTT AGCGATGGCT AGAGCCATTG TTACAGAACC ACCAATTCTA
ATTTTGGATG AATCTACTGG TGGACTTGAT CCAGTGAGTG AAGCCCAAGT TTTAGACGAA
TTATTACACC ATCGCCAAGG TCAAACCACA ATTTTGATTA GTCACCGTCC AAAAGTAATT
AATCGGGCTG ATTGGATTGT TTTATTAGAT CAAGGACGCT TAAAACTTCA AGGTTCTATA
GAAGATTTAC GGACTAAAGC AGGAGAGCAT TTAGATTTTT TAATTCCTTG A
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| Protein sequence | MKYAHVQQHS QEDCGAACLA SIAKHYGRTF TLNRIREAVG TGQFGTTLLG LKRGAETLGF
NARSVKTSPE LLNQINEARL PAIIHWKGNH WVVFYGKKGK KCVISDPAVG IRYLSEKDLV
EGWTDWLMLL VEPNPELFWK LEDDKVSGFW RFFKRVWHFR SLIAQVIPLN LLLGILSLAS
PFLLQILTDD ILIRGDTRLL TTMAIGVFVM NLISGSLAWV QSNLIAHFAQ RLQLGLVLEF
CRQILQLPLS YYEARRSGEI ISRLRDINQI NQLVAQVVIS LPSRFFIAVI SFCIMVFYSW
KLTVVAMIVS VFMTISTIVF LPTLQQKTRE LLIKDAEAQG VLVETFKGAL TVKTTTASPH
FLDELQSRFG HLANVTLRTI QIGIINGTFS GLVSGIGSIA LLWVGGNLVI NPAENLSIGK
LLAFNSMNGN FLGLIGTVIG FVDEFTTAKT AVQRLTEIID TTPENEGDGK KPFTTISGDA
DIICTNVNFH YTGRVDLLED FTLTIPGGKV TAIIGKSGCG KSTVAKLITS LYTLQSGNIR
IGLYNLQDIA LDCLRQQVVL VPQDAHFWSR SIIENFRLGA PFVTFEQIVR ACQVTGADEF
ISRFPDKYQT ILGEFGANIS GGQRQRLAMA RAIVTEPPIL ILDESTGGLD PVSEAQVLDE
LLHHRQGQTT ILISHRPKVI NRADWIVLLD QGRLKLQGSI EDLRTKAGEH LDFLIP
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