| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2389 |
|---|
| Symbol | |
|---|
| ID | 3683232 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 2968932 |
|---|
| End bp | 2970722 |
|---|
| Gene Length | 1791 bp |
|---|
| Protein Length | 596 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 637717735 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_322902 |
|---|
| Protein GI | 75908606 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4627] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.062581 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.00000855128 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTTA GTGTTCTAGT TATAACCTAC AATCATAGCA GATTTATTGC ACAGGCAATA
GAAAGCGTGT TGATGCAAAA AGTTAACTTC GAGTATGAAA TTGTTGTAGG GGAAGATTGC
TCTACAGATG ATACACGCAA AATTTTAATT GATTATCAAC AAAAATATGC AGATAAAATT
CGCTTATTGT TACCTGAAAA AAACTTAGGT ATGCACAGGA ATTTTGTTAA TACTTTGCAA
GCCTGTTGCG GTGAATATGT AGCAATTTTG GAGGGAGATG ATTACTGGAT TGCAGAGGAT
AAACTACAAA AACAAGTAGA CTTTTTAGAT AAAAATTTAG AATTTACGAT TTGTTTTCAT
AATGTAATTA TTTTTCATGA GGATAATCAA TACCAACCCT ACCTATTTCT TCATAATCAA
CCTCCAGTCT CCTATATAGA AGATTTATTA ATACGCAATT TTATTTCCAC ACCCTCTGTA
ATGTATCGCG CTGGATTAGT AGATAATATA CCTAATTGGT TCTATGAACA AGGCATGGGC
GATTGGATTT TCCACATTCT TAATGCACAA TATGGAAAAA TTGGATACAT TGATAAAGTA
ATGTCAGCTT ATAGAATTCA TGCAGAAGGA GTCTGGTCAA GTAAGAACAG AGATTGGCAA
CTAAATAAAA CCATTAAAAT GCTAGATACT GTTAAATCTA ATCTAGATGG GCAGTATGAA
GAAATTATAG ATAGAGCAAT TCAATTTTAT TCGCAGCATT TATTGAAGTT AAATTCTATA
CATCAAGGAA CCACTTCTAA ATTCACTACA AATCTACCCA AACATTTGGA ATTAAAAGAT
ATAAATTTTA TAGTCTTTCC AGATTGGAAT CAAGAAGAGG AACATCTATA TCAAAATCTA
TATTGTCTTG TTAGATTACT CTTAACGCAT CCAGAAAATA ATAGAATTGC TTTATTTATA
GATACAACCA AGATTAGCGA AGAAGATGCT AATTTATGTA TATCTAGTAT TTTAAGTAAT
CTGATATCAG AAGAACAATT AGAAAAAAAT AAAAATATTA ATGTATTTTT AGTCGGTAAA
CTTGACCAAA TTCAGTGGCG AACTCTTACA TCTTTCCTGA AAGCTAGAAT TGTATTAGAT
TCAGAAAATT CAGATGCACT TCTTACTTCT GGAACAGAAA TTATTCCAGC CTATACAGTA
AATCAACTTA TTGAATTTGG CTTAATATTT ATTGGCTCTG CAAAACCTTA TAAATTAAAT
ATTGGCTGTG GCAATGTCAG ATTTGATGGC TGGATAAATA TAGATATAGA GCAAAATTAT
AAAACAGTGG ATTTAGTCTG TGATGCTAGA CAGAAACTAC CATTCGATGA TAATTCTTGT
GAATTAATAT ATAACGAGCA TTTTCTGGAA CACTTAACCT TGAAAGAAGG ATTATTTTTT
TTGAAGGAGT GCTATCGTAT CTTAAAGCCC GAAGGGATTT TACGCATAGC AATGCCGTCC
TTAGAATATG TTGTACAAAA ATATATGTCT GACGATTGGC GTAATCAAGA GTGGCTCAAA
TATCCAGAGT ACCAATTTAT TAAAACACGT GCTGAGATGC TAAATATTTC TATGCGTTGG
TGGGGTCATC AGTGGCTTTA TGATACAGAA GAGTTATATC GCAGATTAAC TGAATCAGGA
TATATAAATA TTCAAGAGTT TGCATGGGGC AAGAGTAATA CACCGGAGTT AAGAAATCGT
GAGACTAGAG TTGATTCAAT ACTGATATGT GAATCACAAG TGCTGAAATA A
|
|---|
| Protein sequence | MKVSVLVITY NHSRFIAQAI ESVLMQKVNF EYEIVVGEDC STDDTRKILI DYQQKYADKI
RLLLPEKNLG MHRNFVNTLQ ACCGEYVAIL EGDDYWIAED KLQKQVDFLD KNLEFTICFH
NVIIFHEDNQ YQPYLFLHNQ PPVSYIEDLL IRNFISTPSV MYRAGLVDNI PNWFYEQGMG
DWIFHILNAQ YGKIGYIDKV MSAYRIHAEG VWSSKNRDWQ LNKTIKMLDT VKSNLDGQYE
EIIDRAIQFY SQHLLKLNSI HQGTTSKFTT NLPKHLELKD INFIVFPDWN QEEEHLYQNL
YCLVRLLLTH PENNRIALFI DTTKISEEDA NLCISSILSN LISEEQLEKN KNINVFLVGK
LDQIQWRTLT SFLKARIVLD SENSDALLTS GTEIIPAYTV NQLIEFGLIF IGSAKPYKLN
IGCGNVRFDG WINIDIEQNY KTVDLVCDAR QKLPFDDNSC ELIYNEHFLE HLTLKEGLFF
LKECYRILKP EGILRIAMPS LEYVVQKYMS DDWRNQEWLK YPEYQFIKTR AEMLNISMRW
WGHQWLYDTE ELYRRLTESG YINIQEFAWG KSNTPELRNR ETRVDSILIC ESQVLK
|
|---|
| |