Gene Ava_2360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2360 
Symbol 
ID3683418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2939188 
End bp2939889 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content42% 
IMG OID637717706 
Producthypothetical protein 
Protein accessionYP_322873 
Protein GI75908577 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00275786 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATAA ATTCTACTGT ACTTCTTACT TTGATTTTGT TATTCCTAAT GTTAGGAGCA 
GGCTCTGTGA GCGCATTTTT GGGATTTGAC TTAGGAAGTT CCGCCCTCAA AGGCGTGACA
ACCCCAGATG GCCGCCCCAC CAGCAAGTTT GCGAGTAGTA AAGCAAATAA CTCCCAAGCA
GGCGCTACAA CCTTCTTAAA AGAAGAAGAA ATATTAAAAA TTGTTAAGTC CCGTATCGAA
GGCAAATCTA AAGTTGCTAA ATCCGAAAAA CTAGATGAAG ACGAAGAGGA TATCAACGGC
AAGAAGCAGA AGCCAGAAGA AAAACCCCCG GAAGTCGTAA CGGAAAAACT CCAACCAGGT
TTTCCCGTTA GTGCCGAAAA TCAAGGCGTA TCCTTATCGG TACAATCTGC CCGTTACTCC
GGCGGTGATT TACTGCTAAA AGTGAAAATG CAGAACAAAG GCGCTGATTC TATCCGCTTT
TTGTATAGCT TTTTAGATGT TACCGACGAC AAAGGTAGAA CTCTTAGCGC TAGCACAGAA
GGTTTGCCAG CAGATTTACC CGCCAACGGC CCCGCGTTTA CTGGTACAAT TAGCATCCCT
ACGGCTTTAC TTGATGATGT TAAAAAAGTA TCTCTTGCTC TTACAGATTA TCCCGATCAA
AAACTAAAGC TAGAAGTCAC AAATATTCCT GTAGATAAAT AG
 
Protein sequence
MRINSTVLLT LILLFLMLGA GSVSAFLGFD LGSSALKGVT TPDGRPTSKF ASSKANNSQA 
GATTFLKEEE ILKIVKSRIE GKSKVAKSEK LDEDEEDING KKQKPEEKPP EVVTEKLQPG
FPVSAENQGV SLSVQSARYS GGDLLLKVKM QNKGADSIRF LYSFLDVTDD KGRTLSASTE
GLPADLPANG PAFTGTISIP TALLDDVKKV SLALTDYPDQ KLKLEVTNIP VDK