| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2348 |
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| Symbol | |
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| ID | 3683463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 2912107 |
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| End bp | 2913873 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637717693 |
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| Product | surface antigen variable number |
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| Protein accession | YP_322861 |
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| Protein GI | 75908565 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.825907 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGTAC ATTCAAAATT ATTAGTTCAA TATACAGAAA ATTCCCTAAT TAAACTCAAA
CTTATAAAAT ATGCTTTTGT GATAGCAGCA GTATTGTGGG ACTATCATCA GGCGATCGCC
CAAACTCCTG ACCCTAGCTC CTTGCCAAAG GATCGTTTAG AAGATATTCC TACTAGGACT
TTACCGTCGG AAGTATTACA AAAACCATCA GATCAAGAGC AATTGCCTAC TCCAACGGAT
TTACCAGAGC AGCAAGATCC AGTACAAAAT GATACTAATG CCAAATTTCG AGTTGATCGG
ATTGAAGTTG TTGGTAGTAA GGTTTTCCCA CCAGAAAAAT TTGCCTCTAT TACAGATCCT
TTTGTAGGAC GAGAAGTATC ATTTGCAGAA CTGTTGCAAG TTAGAGATGC TATCACCAAA
CTCTACACTG ATAACGGCTA TGTAACGACA GGGGCTTTAA TTACACCGCA AACAGTAGAA
GCTGGAGTTA TTACTATTCA GATAGTAGAA GGCAGTTTGC AGGAAATTAA GATTGTTGGT
AATCGGCGAC TGCGTAGTCA ATACATTCGC GATCGCATCC AACTAGGTGC TAGTAAACCT
CTGAATGTAC CGCGCTTAAT AGAAAAGCTA CAAATTCTGC GTCTCGATCC CCGTATTCAA
AATTTGTCAG CCGAGTTACA AATGGGTGTA GCGCCTGGAA CTAACATCTT GCAAGTTGAG
GTACAAGAAG CCGATACCTT CTCGCTGACA GCAACGTTAG ATAATGGGCG ATCGCCTAGT
GTGGGTAGTT TTCGCCGGGG GGTAAATCTG CAAGAGGCAA ATTTACTCGG TTTAGGTGAC
ACTCTCAGCG TAGGATATAG CAATACAGAC GGCAGTAATA GCATTAATTT AAATTACCAG
TTGCCAATTA ATACCCATAA TGGTACTGTA TCCTTCGGTC TTAATCAGGG GTGGAACCGT
GTAATTGAAG ACCCATTCAG CGTCCTAGAT ATTCAATCAA ACACGACCTC TTATGAATTC
GGTTATCGGC AGCCACTAAT CCAAAAGCCA ACCCAGGAAT TAGCGGTGGG GCTATCTTTC
TCACGCCAAG AAAGCCAAAC TGAGTTAGGG CTAGATAATA TTGGTGGGTT TCCTTTATCA
CCTGGTGCGG ATGCAGAAGG AAGAACGAAG ATTTCTGCCT TGCGCTTTAC TCAGGAGTAT
ACTCAACGCA GCAATGAGCA AGTTTTTGCA GCGCGATCGC AATTTAGCTT GGGCGTAAAT
TGGTTCGATG CTAATGTGAA TGAGGATGAA CCAGATAGTC GCTTTTTTGC TTGGCGGGGA
CAGGCGCAGT GGGTAAAGCA GTTAGCCCCA GACACCCTAT TTTTAGCTAG AGGCGATATC
CAACTAGCCT CAACTTCCTT AGTACCCTTG GAACAATTTG GTCTTGGTGG TCAGTTGAGT
GTCCGAGGTT ATCGCCAAGA TACATTACTT ACAGATAATG GTTTATTGTT GTCTGGGGAA
TTGAGATTAC CGATTTTCCG TGCTGCCAAA TTGGGAGGCG TGCTACAACT AACACCTTTT
ATGGACGTAG GTACAGGCTG GAATACCCAA GGCAATAACC CATCACCAAG TACCTTTGTG
GGTACCGGGT TAGGGCTGCT ATGGAAACAA GGGGATAGTT TCTCAGCTAG GCTAGACTGG
GGTATTCCTT TAACATCCGT AGATGGTGAA AAGCGATCGC TCCAAGAAAA TGGGCTGTAC
TTTTCAATAC ACTATACGCC ATTTTAA
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| Protein sequence | MNVHSKLLVQ YTENSLIKLK LIKYAFVIAA VLWDYHQAIA QTPDPSSLPK DRLEDIPTRT
LPSEVLQKPS DQEQLPTPTD LPEQQDPVQN DTNAKFRVDR IEVVGSKVFP PEKFASITDP
FVGREVSFAE LLQVRDAITK LYTDNGYVTT GALITPQTVE AGVITIQIVE GSLQEIKIVG
NRRLRSQYIR DRIQLGASKP LNVPRLIEKL QILRLDPRIQ NLSAELQMGV APGTNILQVE
VQEADTFSLT ATLDNGRSPS VGSFRRGVNL QEANLLGLGD TLSVGYSNTD GSNSINLNYQ
LPINTHNGTV SFGLNQGWNR VIEDPFSVLD IQSNTTSYEF GYRQPLIQKP TQELAVGLSF
SRQESQTELG LDNIGGFPLS PGADAEGRTK ISALRFTQEY TQRSNEQVFA ARSQFSLGVN
WFDANVNEDE PDSRFFAWRG QAQWVKQLAP DTLFLARGDI QLASTSLVPL EQFGLGGQLS
VRGYRQDTLL TDNGLLLSGE LRLPIFRAAK LGGVLQLTPF MDVGTGWNTQ GNNPSPSTFV
GTGLGLLWKQ GDSFSARLDW GIPLTSVDGE KRSLQENGLY FSIHYTPF
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