Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2325 |
Symbol | smpB |
ID | 3683595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 2887118 |
End bp | 2887585 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637717670 |
Product | SsrA-binding protein |
Protein accession | YP_322838 |
Protein GI | 75908542 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0691] tmRNA-binding protein |
TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.595693 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGATA AGAGCGAAAG TTACAAAGTA ATTACTGATA ATCGACAAGC CCGTTACTTG TACGAAATCC TGGAAACTTT TGAAGCCGGC ATTCAGTTGA CAGGAACAGA GGTTAAGTCA ATTCGTGCAG GGAAAGTAAA CCTTCAAGAT GGTTATGCTT TGCTTCGAGA TGGTGAAATA TGGCTAATTA ATGCCCATAT CTCTCCCTAT AACGCTAGTG GGCAGTATTT CAATCATGAA CCAAGACGGA CGCGCAAGCT GTTATTACAC CGTCAAGAAA TTCGGAAGCT GATTGGCAAG GTAGAGCAGC AGGGCTTAAC ATTAGTTCCC TTGAAAATGT ACCTCAAACG TGGCTGGGTC AAAGTTAGTA TTGCTCTCGG TAAGGGGAAA AAGCTCCACG ATAAGCGAGA AAGCCTGAAA CGTCGCCAAG ACCAGCGTGA TATTCAACGA GCAATGAAAA ATTATTAG
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Protein sequence | MSDKSESYKV ITDNRQARYL YEILETFEAG IQLTGTEVKS IRAGKVNLQD GYALLRDGEI WLINAHISPY NASGQYFNHE PRRTRKLLLH RQEIRKLIGK VEQQGLTLVP LKMYLKRGWV KVSIALGKGK KLHDKRESLK RRQDQRDIQR AMKNY
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