Gene Ava_2323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2323 
Symbol 
ID3683593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2885261 
End bp2885734 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content43% 
IMG OID637717668 
Productprotein tyrosine phosphatase 
Protein accessionYP_322836 
Protein GI75908540 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0989989 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTACA AACTGCTGTT TGTCTGCTTG GGGAATATCT GTCGCTCACC ATCGGCAGAG 
AATATTATGA ACCATCTGAT TGAGCAGGCA GGTTTAAGCA ATAGTATTAT TTGTGACTCG
GCTGGTACTT CTAGTTATCA CATTGGTAGT TCACCTGACC GAAGGATGAG TGCTGCTGCT
GTTACGAAGT TAGGAATTAA ACTGCGGGGA CAGGCTAGAC AATTTGTCAA ATCTGACTTC
CAAGAATTTG ACCTAATTCT AGCTATGGAT CGAGACAACT ATGACAACAT TATTGCGCTT
GACCATACTG GACAGTATCA CAACAAAGTC AGTTTAATGT GTGAGTTTTG TTCGCGCCAT
AACCTGAAGG AAGTTCCAGA TCCTTACTAT GGCGGGACAG AAGGGTTTAA TCAGGTGATT
GATTTGCTGG TTGATGCCTG TGAGGGTTTA CTGCAACATA TTACCAGCCA GTAA
 
Protein sequence
MPYKLLFVCL GNICRSPSAE NIMNHLIEQA GLSNSIICDS AGTSSYHIGS SPDRRMSAAA 
VTKLGIKLRG QARQFVKSDF QEFDLILAMD RDNYDNIIAL DHTGQYHNKV SLMCEFCSRH
NLKEVPDPYY GGTEGFNQVI DLLVDACEGL LQHITSQ