Gene Ava_2320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2320 
SymbolmurC 
ID3683590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2881914 
End bp2883398 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content43% 
IMG OID637717665 
ProductUDP-N-acetylmuramate--L-alanine ligase 
Protein accessionYP_322833 
Protein GI75908537 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0773] UDP-N-acetylmuramate-alanine ligase 
TIGRFAM ID[TIGR01082] UDP-N-acetylmuramate--alanine ligase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0792062 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAATA GTGTAGATTT CGGCGGTAGA CCATTTCATT TTATCGGAAT CGGCGGTATA 
GGGATGTCTG CCCTGGCATA CGTTCTTGCA AAACGCCAGT TGCCAGTGTC AGGTTCTGAC
CTTCGTCCTA ATCATATTAC GCGCAAGTTG GAATCTATCG GCGCGCATAT TTTTAGTAGA
CAAGAAGCGA GTAATCTTGA ATTCTTTGGC TCTAAAGTTA GCTCTACTGA AATAGAATTA
AATACACAAG AAATGTTTCC GCTTGGCAAG TCAACATTGC CTCAAGTGGT TTGTTCAACA
GCAATTAACT CGAATAATTT AGAATACCAA GCAGCAATAG AATTAGGATG CCCAATTTTA
CATCGTTCAG ATGTACTAGC GGCTTTAATT AACGATTATC ATAGTGTTGC CGTAGCAGGA
ACTCATGGCA AAACGACAAC TAGTAGCATG ATTGGTTATA TGTTACTAGA AGCGGGTTTA
GATCCAACAA TCATTGTTGG TGGAGAAGTA AATGCTTGGG AAGGCAATGC CAGATTAGGA
CAAAGTCCTT ATTTAGTAGC TGAGGCAGAC GAATCAGATG GCTCCCTGGT CAAACACGCT
CCAGAAATTG GTATTATCAC TAATATTGAA TTAGATCATC CTGACCATTA CGACACCTTA
GAAGAAGTCG TTGATATCTT TCAAACATTT GCCAAGGGTT GTAAAACCTT AATTGGTAGT
GTTGATTGTG CAACAGTGCG CGAGTTGCTT CGCACCGCCG CCAGCGATCG CCAACAACCA
ACTATCACTT ATAGTCTTCA TCAAGATACA GAAGCTGATT ACACCGTTAC TAATATTGAC
TGCCGTGCTG ACGGTACCAC TGCTTTAGTC TGGGAAAAAG GCAAAGCATT AGGTGTACTG
AAACTAAAAT TACTCAGTCG TCATAATCTA AGTAATGCTC TAGCCGCAGT AGCTGTTGGT
CGTCTAGTGG GTCTAGAATT TGGGGAAATC GCCAAAGGTA TCGCTGGTTT TGAAGGCGCA
AGACGACGCT TTGAATTCCG TGGCGAAGTC GATGGTATTA CCTTCATAGA TGATTACGCC
CATCACCCCA GCGAAATCCG GGCTACATTG GCTGCTGCGA GGCTTCAAGC TAGACCAGGA
CAAAGAGTAG TAGCTATCTT TCAACCCCAC CGTTATAGTC GCACCTTGAC CTTTTTAGAA
GAATTCTCTG AGTCTTTCAG TCATGCCGAT TTGGTAGTAC TGACTGATAT TTACAGTGCA
GGGGAGCCCA ATTTAGGACT AATTAGTGGT GAACAGTTGG CAGAAAAAAT TGCTCAAGAA
CACCCACAGG TAGTTTATCA ACCAACTTTA TCTACAGTGT GTGAGTATTT ATTAAAAAAT
CTCCGCCCTG GTGACTTGGC TTTATTCCTG GGTGCAGGAA ATTTAAATCA GGCAATTCCC
GAAATCATTA CCACACTGTG CGAACCTGCG ACAGCCACAT TGTGA
 
Protein sequence
MNNSVDFGGR PFHFIGIGGI GMSALAYVLA KRQLPVSGSD LRPNHITRKL ESIGAHIFSR 
QEASNLEFFG SKVSSTEIEL NTQEMFPLGK STLPQVVCST AINSNNLEYQ AAIELGCPIL
HRSDVLAALI NDYHSVAVAG THGKTTTSSM IGYMLLEAGL DPTIIVGGEV NAWEGNARLG
QSPYLVAEAD ESDGSLVKHA PEIGIITNIE LDHPDHYDTL EEVVDIFQTF AKGCKTLIGS
VDCATVRELL RTAASDRQQP TITYSLHQDT EADYTVTNID CRADGTTALV WEKGKALGVL
KLKLLSRHNL SNALAAVAVG RLVGLEFGEI AKGIAGFEGA RRRFEFRGEV DGITFIDDYA
HHPSEIRATL AAARLQARPG QRVVAIFQPH RYSRTLTFLE EFSESFSHAD LVVLTDIYSA
GEPNLGLISG EQLAEKIAQE HPQVVYQPTL STVCEYLLKN LRPGDLALFL GAGNLNQAIP
EIITTLCEPA TATL