| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2308 |
|---|
| Symbol | |
|---|
| ID | 3678916 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 2868142 |
|---|
| End bp | 2869827 |
|---|
| Gene Length | 1686 bp |
|---|
| Protein Length | 561 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637717653 |
|---|
| Product | NAD(P)H-quinone oxidoreductase subunit 4 |
|---|
| Protein accession | YP_322821 |
|---|
| Protein GI | 75908525 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
|---|
| TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGGCGG ATGGATTTCC TTGGCTGACC GCGATTATAT TACTACCACT CGTTGCTTCT
GCATTTATTC CCCTGCTGCC TGATAAAGAA GGTAAGCTCG TGCGATGGTA TGCCTTGGGT
GTAGGAATCG CGGATTTTGT TTTGATGTGC TATACCTTTT GGCACCATTA CGATGCAAGC
AGTGCGACTT TTCAACTAGT GGAGAAATAT GATTGGGTAC CTCAGATAGG TTTTAGCTGG
GCGGTCTCAG TCGATGGAAT ATCCATGCCA CTAGTGTTGC TGGCAGGATT TGTGACGACC
CTTTCTATGT TGGCTGCATG GCAAGTTAAT CTCAAGCCTC GCCTGTTTTA TTTCTTAATG
TTGGTGTTGT ATTCTGCCCA AATCGGGGTA TTTGTCGCCC AAGATTTGCT GTTATTCTTC
ATTATGTGGG AACTGGAATT GGTTCCTGTT TACTTGCTTG TCTCGATTTG GGGCGGACAG
AAACGCCGCT ACGCTGCGAC AAAGTTCTTG CTTTATACAG CAGCAGCTTC AATTTTCATC
TTAATCGCTG GGCTGGCAAT GGCTCTCCAC GGCGATAATA CTACTTTCGA TATTGTCGAA
CTCGGTGCGA AAAACTATCC TCTGGCTTTA GAGTTATTAC TTTATGCTGG ATTACTAATT
GCCTTTGGTG TGAAGCTGGC AATTTTTCCC TTACACACCT GGTTGCCTGA TGCCCACGGT
GAAGCTTCAG CACCTGTATC GATGATTTTG GCAGGGGTGC TTCTAAAAAT GGGTGGTTAC
GGACTAATTC GCCTGAATTT GGAATTACTG CCAGACGCTC ATATTTACTT TGCTCCAGTG
TTAGCAACTT TGGGTGTAAT CAATATTATC TATGGCGGTT TGAACTCCTT TGCTCAAACT
CATATGAAGC GCCGCCTTGC TTATTCTTCC GTTTCCCACA TGGGGTTTGT GCTGCTGGGT
ATTGCCTCTT TCACCGATGT GGGTGTGAGT GGTGCTATGC TGCAAATGCT TTCACACGGT
TTGATTGCGG CGGTGTTGTT CTTCTTGGCT GGTGTAACAT ACGATCGCAC CCATACAATG
GCGATGGATA ATTTGGGTGG TATCGGTCAA GCTATGCCCA AAGTGTTCGC TTTGTTTACC
GCCGGCACAA TGGCATCTTT GGCACTTCCA GGAATGAGTG GCTTTGTCAG CGAACTTAAG
GTGTTTATTG GTGTTACCAC TAGCGACATT TACAGTCCGA CATTCTGCAC CGTTATGGTA
TTCCTCGCCG CAGTAGGAGT TATCTTAACG CCGATTTATC TACTGTCTAT GTTGAGACAA
GTATTTTACG GCACTGGTGC AGAACTCAGT TGCAATATTA ACAATGGTGC TTACGAGAAC
CAGGAAGATG AAGGAACAGC TTGCTTTGGT ACAGACTGTC TCTTACCAGG GGAAGCTGTA
TACAGAGATG CCAGTATCCG GGAAGTATTT ATTGCTGCGT CCTTCTTGGT GTTGATTATT
GGTGTAGGTG TCTATCCTAA AATCGCTACG CAACTTTACG ATGTGAAAAC CGTAGCAGTT
AATACTCAGG TACGCCAATC CTATACCCAA ATTGCCCAAA GCAATCCTCA GATATATGCT
AAAGGTTTCT TTGCTCCCAA AATTGTAGAG CCTGAAGTCA TGGCGGTTTC GGGAATGATC
AAATAA
|
|---|
| Protein sequence | MMADGFPWLT AIILLPLVAS AFIPLLPDKE GKLVRWYALG VGIADFVLMC YTFWHHYDAS
SATFQLVEKY DWVPQIGFSW AVSVDGISMP LVLLAGFVTT LSMLAAWQVN LKPRLFYFLM
LVLYSAQIGV FVAQDLLLFF IMWELELVPV YLLVSIWGGQ KRRYAATKFL LYTAAASIFI
LIAGLAMALH GDNTTFDIVE LGAKNYPLAL ELLLYAGLLI AFGVKLAIFP LHTWLPDAHG
EASAPVSMIL AGVLLKMGGY GLIRLNLELL PDAHIYFAPV LATLGVINII YGGLNSFAQT
HMKRRLAYSS VSHMGFVLLG IASFTDVGVS GAMLQMLSHG LIAAVLFFLA GVTYDRTHTM
AMDNLGGIGQ AMPKVFALFT AGTMASLALP GMSGFVSELK VFIGVTTSDI YSPTFCTVMV
FLAAVGVILT PIYLLSMLRQ VFYGTGAELS CNINNGAYEN QEDEGTACFG TDCLLPGEAV
YRDASIREVF IAASFLVLII GVGVYPKIAT QLYDVKTVAV NTQVRQSYTQ IAQSNPQIYA
KGFFAPKIVE PEVMAVSGMI K
|
|---|
| |