Gene Ava_2305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2305 
Symbol 
ID3678913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2865641 
End bp2866045 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content44% 
IMG OID637717650 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_322818 
Protein GI75908522 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTAC AAGATGAGCC AGATATTCCA GCACAGATCA ACATTGTGCC GATGATCGAT 
GTGATTTTTG CGATTTTGAC ATTTTTTATC ATGTCTACGC TGTTTTTAAC TCGTTCAGAA
GGCTTGCCAG TTAATTTACC AAAAGCGGCA ACGGCAAAAC AACAGCAAGT ACCTGCAAAG
ATTACGATCA CGGTAGATGA ACAAGGGGCG GTTAGCTTGA ATCGTCAACC GATTCTAGTT
GATGCTGTGG CGGGACAGTT ACGTAACCTA GTTGGTGCTA ACCAGGAAGC CCTAGTAGTT
ATTAATGCTG ATGAAAGAGT AGGACATGGT AAGGTAGTGG CCATCATGGA TCAAGTACGT
CAGGTACAGG GAGCAAAATT AGCGATCGCC ACTCAAAAAC GTTAA
 
Protein sequence
MRLQDEPDIP AQINIVPMID VIFAILTFFI MSTLFLTRSE GLPVNLPKAA TAKQQQVPAK 
ITITVDEQGA VSLNRQPILV DAVAGQLRNL VGANQEALVV INADERVGHG KVVAIMDQVR
QVQGAKLAIA TQKR