Gene Ava_2290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2290 
Symbol 
ID3678957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2847293 
End bp2847781 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content44% 
IMG OID637717635 
Producthypothetical protein 
Protein accessionYP_322803 
Protein GI75908507 
COG category[S] Function unknown 
COG ID[COG4329] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCAA ATAGTGGTTA CTTCGGTAAG CATTTACCAC TAATTTCTGC GGGAATTTTT 
TTAGGTTTGG GATTAGGAGG CTTTGTAGAT GGTATTCTCC TGCATCAAAT CCTCCAGTGG
CACCATATGT TAAGCAGCGT TCGACCCTTG ACCACCGACT CTAACATAGA TGTGAACATG
GTATGGGATG GTTTATTTCA TGCTTTAGAT TGGGTGTTGA CTGTAATTGG AGTGGTATTG
TTGTGGAGGG CTGGAGGACG TGATGATGTG GTGTGGTCAT CACGCACCTT TGGCGGTTCT
TTGCTTGTGG GTGCTGGGTT ATTCAACCTG GTGGAAGGAA TAATTAATCA CCAAATTCTG
GGTATTCATC ACGTAAAACC AGGGGTACAT CAGTTAGCTT GGGATTTAGG ATTCTTGGTT
TTGGGAGCGT TGCTTGTCTT GGTAGGTGGG ATGATGCTAC AAAGGGGCAA CACTGAAATT
AGTGAGTAG
 
Protein sequence
MEANSGYFGK HLPLISAGIF LGLGLGGFVD GILLHQILQW HHMLSSVRPL TTDSNIDVNM 
VWDGLFHALD WVLTVIGVVL LWRAGGRDDV VWSSRTFGGS LLVGAGLFNL VEGIINHQIL
GIHHVKPGVH QLAWDLGFLV LGALLVLVGG MMLQRGNTEI SE