| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2286 |
|---|
| Symbol | |
|---|
| ID | 3678953 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 2843485 |
|---|
| End bp | 2844966 |
|---|
| Gene Length | 1482 bp |
|---|
| Protein Length | 493 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637717631 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_322799 |
|---|
| Protein GI | 75908503 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.185851 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCTGATA AAAATCGTTC TCAATGGAAC TTATGTAGGT TTATTGAAAC GCTGACTTAC
TTCGAGGTAA TTCCTTTTTT GAATTGGGTG CAGCAATTAA TCCAAGGTCG TCCCCAGGAT
AATCAACCTC GAACTGATGG AGAAAATAAC ATGGGTGTAA TTCTAGTAGC AGGTGCAACG
GGTGGTGTTG GTAAACGAGT AGTACGGAAA CTCAGAGAAC GCGGTGAAAA AGTCCGCGCC
CTCGTACGAG ACATTGATAA AGCACGGTCA ATTCTTGGTG ATGATGTTGA TTTAGTAGTG
GCGGACATTA CTAAACCGGA AACATTAACT CCTATGGTTA TGGCTAATAT CCAGGCCGTG
ATTTGTTGTA CCGCAGTACG CATCCAACCA GTGGAGGGAG ACACCGCAGA TAGAGCCAAA
TATTATCAAG GCGTAAAATT TTATCAACCA GAAATTGTTG GTGATACCCC AGAAAATGTC
GAATATCAAG GAATTAAAAA TTTAGTCACA GCAGCCGCCA ATTATTTACC TGCAACTAAT
GAAAAACTCA TATTTGATTT TACCCATCCA TCAACAGAGT TAAAAAATAT TTGGGGTGCG
CTGGATGATG TCGTCATGGG AGGAGTAAGT GCTAGTAATA TTCAATTAGT AGAAAATACT
GCTTCATTTG CTGGTAATGT CTCTACTGCG AACTCAGGAG GATTCGCATC TGTTAGGACA
AGAAACTTTG AACCACCATT CAATTTATCT GGTTACGAAG GTGTGGAATT GCGGGTGAAA
GGTGACGGTC AACGTTACAA AATCTTCCTA CGGACAGAGA CTAAATGGGA TGGGCTAGGA
TACAGCTATT CTTTTGATAC TGTAGAGAAT ACATGGATTA ATATCCGTGT TCCCTTTACA
GAATTAGTTC CGGTATTTCG GGCAAAAATA GTCCAAGATG CGCCACCTAT TGACAGTAGT
AGAGTTAGTT CATTCCAACT AATGTTAAGT AAATTTGAAT ATGATGGTGC TTTAAATCCT
AAATTCTCAG CAGGTGGTTT TGCTCTACAG TTAGAATTTA TCAAAGCTTA TGGTGGAGCA
AATACACCAA AATTTGTGCT TGTAAGTTCC GCAGGTGTAA CCCGTCCTGG TAGGCCAGGA
ATTAATTTAG ATGAAGAACC TCCAGCCGTT AGATTAAATG ACCAACTGGG AGGAATTTTG
ACATGGAAGT TAAAAGGAGA AGATAGTTTA AGAGCAAGCG GCATTCCTTA CACTATTATC
AGACCTTGTG CTTTAACTGA AGAACCAGGA AGCAAGGCAT TAATTTTCGA GCAAGGTGAT
AATATTCGAG GCAAAATCAG CCGAGAGGAT GTAGCAGAAT TGTGTGTACA AGCGCTACAA
CAAAAGAGAT GTAATGTAAC GTTTGAGGTC AAGGAAGGGA CGAATGTTGC TGAGGTTGTT
GATTGGCAAC AGTTATTTGT CAATTTAGAA TCTGAACGAT AA
|
|---|
| Protein sequence | MADKNRSQWN LCRFIETLTY FEVIPFLNWV QQLIQGRPQD NQPRTDGENN MGVILVAGAT
GGVGKRVVRK LRERGEKVRA LVRDIDKARS ILGDDVDLVV ADITKPETLT PMVMANIQAV
ICCTAVRIQP VEGDTADRAK YYQGVKFYQP EIVGDTPENV EYQGIKNLVT AAANYLPATN
EKLIFDFTHP STELKNIWGA LDDVVMGGVS ASNIQLVENT ASFAGNVSTA NSGGFASVRT
RNFEPPFNLS GYEGVELRVK GDGQRYKIFL RTETKWDGLG YSYSFDTVEN TWINIRVPFT
ELVPVFRAKI VQDAPPIDSS RVSSFQLMLS KFEYDGALNP KFSAGGFALQ LEFIKAYGGA
NTPKFVLVSS AGVTRPGRPG INLDEEPPAV RLNDQLGGIL TWKLKGEDSL RASGIPYTII
RPCALTEEPG SKALIFEQGD NIRGKISRED VAELCVQALQ QKRCNVTFEV KEGTNVAEVV
DWQQLFVNLE SER
|
|---|
| |