Gene Ava_2280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2280 
Symbol 
ID3678947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2836574 
End bp2837254 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content44% 
IMG OID637717625 
Producthypothetical protein 
Protein accessionYP_322793 
Protein GI75908497 
COG category[S] Function unknown 
COG ID[COG3544] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGCC TGTATGTAAA AAATCGCTTT TTGGCGTTTA GCTTTGTAGT GATGACATCC 
CTAAGCGGTG GAGTGTTGAG CGCTTGTTCT ACAACGTCTC AAGCCCAAAA TGAAACCCCT
AAAGCCACTG TAACTGATGC TAATAACCAG CAACAGCATC ATGATCACAG CATGGACATG
GATTTAGGCC CAGCAGATGC TGACTATGAA TTACGATTCA TCGATGCCAT GATTATGCAC
CATCAAGGAG CAGTGGACAT GGCGAAGGAA GCGCAACAGA AGTCCAAAAG AACGGAAATC
AAGCAACTAG GAACTGATAT TATCAAAGCC CAAAACCAAG AAATTGCTCA AATGAAGCAG
TGGCGAACAG CTTGGTATCC CAAAGCTGGG GATCAGCCAA TGGCTTATGA TGCCAAAATG
GGTCACATGA TGGCGATGTC ACCTCAGCAA CAGCAAGCCA TGATGATGAG TATGAATTTA
GGTACAGCAG ATGCCGAATT TGATTTACGG TTTATCAATG CCATGATTCC CCATCATGAA
GGTGCTGTAG TCATGGCACA AGATGCTTTA CAGAAATCGC AGCGATCAGA AATTAAGAAG
TTAGCTCAAG CAATTATCAA AGCGCAAAAA GGGGAGATTC AGCAAATGGA ACAGTGGCGT
AAAGCTTGGT ATAACCAGTA A
 
Protein sequence
MQRLYVKNRF LAFSFVVMTS LSGGVLSACS TTSQAQNETP KATVTDANNQ QQHHDHSMDM 
DLGPADADYE LRFIDAMIMH HQGAVDMAKE AQQKSKRTEI KQLGTDIIKA QNQEIAQMKQ
WRTAWYPKAG DQPMAYDAKM GHMMAMSPQQ QQAMMMSMNL GTADAEFDLR FINAMIPHHE
GAVVMAQDAL QKSQRSEIKK LAQAIIKAQK GEIQQMEQWR KAWYNQ