Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2280 |
Symbol | |
ID | 3678947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 2836574 |
End bp | 2837254 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637717625 |
Product | hypothetical protein |
Protein accession | YP_322793 |
Protein GI | 75908497 |
COG category | [S] Function unknown |
COG ID | [COG3544] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACGCC TGTATGTAAA AAATCGCTTT TTGGCGTTTA GCTTTGTAGT GATGACATCC CTAAGCGGTG GAGTGTTGAG CGCTTGTTCT ACAACGTCTC AAGCCCAAAA TGAAACCCCT AAAGCCACTG TAACTGATGC TAATAACCAG CAACAGCATC ATGATCACAG CATGGACATG GATTTAGGCC CAGCAGATGC TGACTATGAA TTACGATTCA TCGATGCCAT GATTATGCAC CATCAAGGAG CAGTGGACAT GGCGAAGGAA GCGCAACAGA AGTCCAAAAG AACGGAAATC AAGCAACTAG GAACTGATAT TATCAAAGCC CAAAACCAAG AAATTGCTCA AATGAAGCAG TGGCGAACAG CTTGGTATCC CAAAGCTGGG GATCAGCCAA TGGCTTATGA TGCCAAAATG GGTCACATGA TGGCGATGTC ACCTCAGCAA CAGCAAGCCA TGATGATGAG TATGAATTTA GGTACAGCAG ATGCCGAATT TGATTTACGG TTTATCAATG CCATGATTCC CCATCATGAA GGTGCTGTAG TCATGGCACA AGATGCTTTA CAGAAATCGC AGCGATCAGA AATTAAGAAG TTAGCTCAAG CAATTATCAA AGCGCAAAAA GGGGAGATTC AGCAAATGGA ACAGTGGCGT AAAGCTTGGT ATAACCAGTA A
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Protein sequence | MQRLYVKNRF LAFSFVVMTS LSGGVLSACS TTSQAQNETP KATVTDANNQ QQHHDHSMDM DLGPADADYE LRFIDAMIMH HQGAVDMAKE AQQKSKRTEI KQLGTDIIKA QNQEIAQMKQ WRTAWYPKAG DQPMAYDAKM GHMMAMSPQQ QQAMMMSMNL GTADAEFDLR FINAMIPHHE GAVVMAQDAL QKSQRSEIKK LAQAIIKAQK GEIQQMEQWR KAWYNQ
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